Fusarium graminearum: FGSG_08869
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Entry
FGSG_08869 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_08869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_08869
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_08869
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FGSG_08869
Spliceosome [BR:
fgr03041
]
Complex A
U2 snRNP components
U2 related factors
FGSG_08869
Complex B
FGSG_08869
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FGSG_08869
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
90S particles
Helicases
FGSG_08869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
23555849
NCBI-ProteinID:
XP_011319841
UniProt:
I1RX24
LinkDB
All DBs
Position
2:complement(340177..341766)
Genome browser
AA seq
367 aa
AA seq
DB search
MAFQESFSTRLSGEIDSDHIDQILNFVLFDQHEPAIACTQSLRNNAISAAGDTSRLVYMT
DVRLLELAKSDVLFQKYSAVTSRLDLKVIVMSDTANVSKFLGYFERGVHFAIPSDSFQVD
IRWLLDPDPNFLELAVHTAKHIHETTGDGDILISLTDSGLAIDTRFNPRAGIEIQSMAPI
SQAEARYRARQAGRSGVCYRLYTKSDFDEVLLPTVLPPILVSDLSELVLQLKVIGINDVA
NFDFVDKPHPEVFLRALEDLHAMGYLTDVGVITERGHKAARLPVHPLWYNALERAHELGC
SDEIITIAATKSVRNYILTRPSATRQAADLAHQQFSCPMSDHITGLNAFHAYLDTEASSD
HSDALQS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggccttccaagaatcgttcagcacccgtctttctggtgaaatagactcagatcatatt
gaccagatcctcaactttgtcttatttgaccaacatgaaccagcaatcgcttgtacccag
tcgctacgaaacaatgctatcagtgctgcaggggacacatcacgcctggtatacatgacg
gacgtgaggctgcttgagctggccaagagcgatgttctcttccagaaatacagtgctgtg
acctctcgtctcgacctcaaagtgatcgtcatgtcggacactgcgaatgtcagcaagttc
cttggatactttgagcgaggagtccacttcgcgataccctcggacagttttcaagttgac
atccgctggcttctcgatcccgatcccaacttcttagagctagccgtacacaccgcgaag
catattcatgaaactactggagatggagatatcctcatatctctgacagactccgggtta
gcaattgacacccgattcaatccccgcgctggcattgagattcagtctatggcacccata
tcacaagccgaagctcgctatcgagctagacaggccgggagatctggtgtatgctatcgc
ctctacaccaagagtgactttgacgaggtccttcttcctactgtcctgcccccaattctt
gtcagcgacctctcggagcttgtcctacaattaaaggtcataggtatcaacgatgtggcc
aattttgactttgttgataagcctcatccagaggtattcctccgtgctcttgaggatcta
catgccatgggctacctcacagatgttggagtcatcaccgaaaggggtcataaagctgca
aggcttccagtacatccactctggtacaatgcattggaaagggcacacgaactcggttgc
agcgacgaaatcataaccattgctgccacaaaaagcgttcgcaactacatcttgactcga
ccctctgctaccagacaagcagcagacctggcacaccaacaattctcctgccccatgtct
gaccacatcacagggctcaatgcttttcacgcctatctcgacacagaagcctcgtctgac
cactccgatgcgctgcagtcgtga
DBGET
integrated database retrieval system
