Fusarium graminearum: FGSG_08928
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Entry
FGSG_08928 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_08928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_08928
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FGSG_08928
mRNA degradation factors
3'-5' decay
Pan complex
FGSG_08928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
23555906
NCBI-ProteinID:
XP_011319767
LinkDB
All DBs
Position
2:complement(101607..103462)
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AA seq
430 aa
AA seq
DB search
MPYHRVPHDFFLPEKEREEIARKLEAAGQVLPNSQLPQLDNYHNLVPLDTTHRKNANIFG
YPSWVYKATATKTGNLYCLRRLEGYRLTNEQAIKLVKEWRRVNSGSVVTIIDAFTTRAFG
DSSLVFVQDYYPLSKTLVEAHLTPSTTHGNRFQAKTPVVENVLWVYISQLANALQAIHSN
NLAARCIDPSKIILTHKNRIRLSACSILDVVQYDAHRSIQELQQEDFIQFGRLLLCLTTN
TLPVHLTNYQMSLEQMSRAYSVEIRDTILWLLTPQQPPAQKGIEEFVRGIAGRITFTFDQ
NLQALDKANTDVMREIENGRAARLMMKLATINERPEFEGDRTWAENGERYMLKLFRDYVF
HQVDNNGKPVLDMGHMLRCMNKLDIGSDERICLTSRDEQTSFLVSYKELKKMLANTFGEL
VKGSKSGRGF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccctatcatcgtgtaccgcacgacttcttcctgcctgagaaggagcgcgaagagatt
gcccggaagcttgaggcagccggccaagtcctccccaactctcaactaccgcaactcgat
aactaccacaacttggtgccattggacacgacccatcgaaaaaatgctaatatctttggc
tacccaagctgggtctataaagctacggcaaccaagacaggcaacctttactgtttgagg
cggctcgaaggttaccgattaaccaacgaacaagcaatcaagcttgtgaaagaatggcga
cgtgtcaacagcggcagcgtggttacaatcattgatgcatttacgacgcgtgcctttgga
gacagttcgctcgtttttgtgcaagactactaccctctctccaagacacttgttgaggct
cacttaactccaagtactactcatggtaatcgtttccaagcgaaaacccctgttgttgaa
aatgtcctctgggtctacatctcacagctcgccaatgctctccaagctatccattccaac
aacttggcagcccgttgcatcgatccgagcaagatcatattgactcacaaaaaccgaatt
cgtctcagtgcatgctccatcctcgatgttgtgcagtatgatgcacaccgatcgattcag
gaactccagcaagaagactttatccaattcggacgtttgctgctttgcttgacaaccaac
acgttgccagtacacctgaccaactaccaaatgtcgttggaacagatgtccagggcatat
tccgtggagatcagagacactattttatggcttctcacaccccagcagcctcctgcgcag
aagggtattgaggagtttgtacgcggaatcgccgggcgaattactttcacttttgaccag
aatctgcaagctctagacaaggccaataccgacgtgatgcgggagatcgagaacggaagg
gctgcgagactgatgatgaaactcgcaaccattaacgaacgacctgaattcgagggggat
cgaacatgggctgagaatggcgaacgctatatgctcaagctgtttagagactatgttttt
catcaagtcgacaacaacggcaaaccagtcctggacatgggacacatgctccgatgcatg
aacaagctagatattggatcagacgagagaatctgtctgacaagtcgagacgaacagacc
agcttccttgtgagctacaaggagctcaagaagatgctggcgaacacatttggtgaactt
gtgaaagggagcaagtcaggacgaggcttctga
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