Fusarium graminearum: FGSG_08929
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Entry
FGSG_08929 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_08929
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_08929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_08929
03041 Spliceosome [BR:
fgr03041
]
FGSG_08929
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FGSG_08929
mRNA degradation factors
5'-3' decay
Lsm complex
FGSG_08929
Spliceosome [BR:
fgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FGSG_08929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
23555907
NCBI-ProteinID:
XP_011319766
UniProt:
V6RIS2
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All DBs
Position
2:100251..101440
Genome browser
AA seq
131 aa
AA seq
DB search
MSDRPSHRGGRGQGSHPRGGRGGGRGGGAGGAQQERERPKKENILDLGKYMDKQITVKFN
GGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRGTLLVLVSPVDGSEE
IANPFVQPEDD
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaccatcacaccgaggtggccgcggccaaggatcacatcctcgaggtgga
cgcggaggcggtcgcggaggaggcgcgggaggcgctcagcaggagcgcgagagacccaag
aaggagaacatccttgacctgggcaagtacatggacaagcagatcaccgtcaagtttaac
ggtggccgtgaggtcaagggcacgctgaagggctatgacgctctgatgaacctggttctg
gatgatgtgcatgaggttgttcgagacgacgaaggcaacgagtctactcgatccctcggt
cttgtggttgtacgaggcaccctccttgttcttgtcagccccgtcgacggcagtgaagaa
attgccaacccttttgttcaacccgaggatgactga
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