Fusarium graminearum: FGSG_09930 Help Entry FGSG_09930        CDS       T01038                                  Name (RefSeq) ATP-dependent helicase NAM7   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism fgr  Fusarium graminearum Pathway fgr03013   Nucleocytoplasmic transport fgr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fgr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     FGSG_09930    03015 mRNA surveillance pathway     FGSG_09930  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fgr03019]     FGSG_09930 Enzymes [BR:fgr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      FGSG_09930     5.6.2.5  RNA 5'-3' helicase      FGSG_09930 Messenger RNA biogenesis [BR:fgr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      FGSG_09930    mRNA cycle factors     Common to processing body (P body) and stress granule      FGSG_09930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase Helicase_RecD Viral_helicase1 PIF1 ATPase NPHP3_N SLFN-g3_helicase nSTAND3 SRP54 AAA_22 AAA_25 TraI_hel_assoc_N PhoH Motif Other DBs NCBI-GeneID:  23556856 NCBI-ProteinID:  XP_011318837 UniProt:  I1RZS7 LinkDB All DBs Position 1:9187528..9190833 Genome browser AA seq 1083 aa AA seqDB search MEGAFTHVGNHLISDSAAAIKAGADDLSTIDPDESLLYAKYGDRNGRRRADDDDNQTEVF EEDDNDSLNSVPVDGLNGLKLKGKEEEKELPAHACAYCGIHSPGCVVKCLTCNKWFCSAR GNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLL CRQPCAANTSNKDMNWDTSRWQPLIEERAFLPWLVATPSDSEQLRARHLTPNMIAKLEEM WKIEPKATVVDLEKAASIDDDPQPVLLNYDDPYHYQNIFGPLVKMESDYDKKLKEAQSED GLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNN QSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFH TLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPPGTGKTVTSA TIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHE QVRMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCCTCVGAGDP RLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS LFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGE MPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGVITPYEGQRSYI VTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVAL TRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSFRQK NQQPQFGAGSYSNGGRFNPPPSGRDFDLGSMVSYIPDDVSSVHGSAFGGASLNSAFPPMF SSFTPDQWPGLPGVAAPGRGGKSRGRATESIAGESVANSEYTDASSSVIGGKGVGQGGVS LGAGLHDAVTGMRPVSYSQSDRLKQYVESSGRMVPGSGYGRRFDDDEKSVSTAFHSQIGG GYD NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt atggagggcgccttcacccatgttgggaatcatctgatatccgattccgctgctgctatc aaggcaggagccgatgatctttctacaatcgaccccgacgagagcttactctatgccaaa tacggagatcgaaacggccgccgccgagctgacgatgacgacaaccaaactgaagtattt gaggaagacgataacgatagtctaaacagcgttccggttgatggactgaacggactcaag ctcaagggcaaagaagaggagaaggagcttccggctcacgcatgcgcatactgcggcatt cactctccaggatgtgtcgttaaatgtctcacatgcaataaatggttttgcagtgcgaga ggcaatggtacttcgacccacatcgtgaaccacctcgttcgagctcgccacaaggaagtt cagcttcacccagagtctaccctcggcgataccgttttggaatgctacaattgtggaaca aagaatgctttccttttgggtttcatcccagcaaagtccgatactgttgttgtccttctc tgccgacagccttgtgccgccaacacctcgaacaaggacatgaactgggatacatcacga tggcaaccactgatcgaagagcgagcctttctaccatggctggttgcgacgccatcagac tccgagcaacttagagcccgtcaccttacaccgaacatgattgccaaactagaggagatg tggaagattgagcccaaagcgacagtggttgaccttgaaaaggcagccagtattgatgac gatccccagcctgtcctattgaactacgatgatccctaccactatcagaacatcttcggt ccattggttaagatggaatccgactacgacaagaaattgaaggaagcacaatctgaagat ggactcttggttcgttgggactacggtctgaacaacaagcatcttgtgagcttcaatctt cacaagattgagtccggcgacgtaaagcttgctgtcggtgacgagatgcgcctacgatac aaaggcgagctacgatctccttgggaaggagtcggctatgttattaagatcccgaacaac cagtctgacgaagttacgcttgagttgcgcaagactggaaacgagaagctcgttcccacc gacctgtctcacaacttttcggccgattatgtctggaaagcgacatcctatgaccgtatg caactggccatgaaaaccttcgctgtcgatgacatgagtgtatctggttacatcttccac actctgctgggtcacgaggttcagctacaagttatgaagacgaacctgcctaagaagtgg tctgctcctggtcttcctgatctcaaccctagccaagtcggcgcgataaaagcagttctg cagaagccccttagcttgatccaaggacctcccggaaccggtaagactgtaacctctgcc accattatctaccatctagccaagatgagtggaaaccaggttctagtctgcgcaccctcc aacgtcgctgtggatcagctttgcgaacgcgtccaccgcactgggctcaaggtggtccgc ctcacagccaaatctcgtgaggatgtcgaatcatctgtcagtttcttggctctccatgaa caggtccgcatgtcagagcacaacagcgagcttgtcaagctatcgcagctcaagaacgag ctgggtgagctttcaagtcaggatgagaaaaagtacaagcaactcaccaagattgccgaa cgtgacattctcaacaatgccgacgttgtttgctgcacttgtgtgggtgccggtgatccc cgcctgtcgaagatgaagttcagaaacgtcctgatcgacgagtcaactcaatcagcagag cctgagtgcatgatcccccttgttcttggatgcaagcaagttgtccttgtgggtgatcat aagcaactcggccctgtcatcatgaacaagaaggctgccaaggccggtcttaaccagtca ctttttgagcgcttggtcaatctgaagctttccccgatccgactgaatatccagtaccgt atgcacccttgcctttctgaatttccctccaatatgttttacgacggtagtctgcagaat ggtgtcacccacgaaaaccgcttgcgcaaggatgtcgactttccttggccagtcggtgaa atgcccatgatgttctggtctaatttgggccacgaagaaatttctgcctcgggaacatcg tatctcaaccgcacggaagcatccaacgttgagaaagcagtcactcgcttcttcaaggcc ggggtgaagcctgctgatattggtgtcattaccccatacgaaggtcaacgaagctacatc gtgactactatgcaaaactcgggaacttataagaaggagtactacaaggaggtagaggtc gcttcggttgatgctttccagggccgtgagaaggattttattgtcctctcatgtgtccga tccaacgataaccagggtattggtttcttgtcggacccccgccgtctcaacgtggccttg acccgagctaaatacggtcttgtcattcttggcaatcccaaggttctgtccaagcacgag ctctggcacaacttgcttgttcatttcaaagatcgcaagtgcttcgtcgaaggccctttg accaacctccaggcatgtctgcttcagttcagtcgccccaaagttagtttccgccagaag aaccagcagccgcagttcggagctgggagctactctaacggaggacgtttcaacccgcct ccttcgggtcgggacttcgatttgggctccatggtgtcgtacatccccgatgatgtatct tctgttcacggttctgcgtttggcggcgcttccctcaacagcgccttcccccccatgttc tcgagcttcacaccagaccagtggcctggtctaccaggtgtagctgctcctggccgagga ggcaagagccgtggccgtgccactgaaagcattgcgggcgaaagcgtggccaattccgag tatacggacgcatcttcaagtgtgattggcggcaagggagtagggcaaggcggcgtcagt cttggagcaggacttcatgatgctgtcacgggcatgcgacctgtctcgtatagtcaaagc gaccgcctcaagcagtacgtcgaaagcagtggacgcatggttcccggtagcggctatgga cgacgttttgatgacgatgagaagagtgtcagcacggcattccacagccagattggagga ggttacgattga

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