Fusarium graminearum: FGSG_10242
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Entry
FGSG_10242 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_10242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_10242
Spliceosome [BR:
fgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FGSG_10242
Complex C
U5 SnRNP specific factors
FGSG_10242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
TPR_2
TPR_CcmH_CycH
TPR_8
ARM_TT21_2nd
TPR_9
TPR_11
ARM_TT21_5th
TPR_15
TPR_21
NatA_aux_su
GILT
Motif
Other DBs
NCBI-GeneID:
23557157
NCBI-ProteinID:
XP_011319192
UniProt:
V6RY33
LinkDB
All DBs
Position
1:complement(10239289..10242084)
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AA seq
931 aa
AA seq
DB search
MSGRRDFLNQAAPENYVAGLGRGATGFTTRSDLGPARDGPSEDQIKEALAKRAAQLGLAP
DKKGKDKEEDEGNNDEERYQDPDNEVGLFAGGVYDKDDEEADKIWEWVDERMDRRKKQRE
AREQAEQDEYERNNPKIQQQFSDLKRALATVTDDEWANLPEVGDLTGKNRRSKKALRERM
YAVPDSALAAARDAGQMGTTVMDEDMAPSAGGGDAADGTMTNFAKIGAARDKVLKSRLEQ
AGSDSVAPGTSTSIDPQGYLTSLDKNKAATGNPEGNVGDVNRVRELLQSVVKTNPSNALG
WIAAARLEELAGKTVTARKTIDKGCAQCPKSEDAWLENIRLNEGSPNAKIIARRAIEANN
SSVRLWVEAMRLEVIPSNKKRVIRQALDHIPESEALWKEAVNLEESVDDAKLLLAKATEL
IPLSIDLWLALARLETPENAQKVLNRARKACPTSHEIWIAAARLQEQLGQGTKVNVIKRG
VQVLAKESAMPKREEWIAEAERCEDEGAIITCQNIIRETLGWSLDEDDDRKDIWMEDARS
SINRGKYETAKAIYAYALRVFVNSRTMWMAAADLERNHGTRDSLWQVLEKAVDACPKSED
LWMMLAKEKWRAGELDGARLVLKRAFNQNPNNEDIWLSAVKLESESGNEEQARKLLEIAR
EQAPTDRVWMKSIVYERVLGNIEAALDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPAR
EAYATGVKAVPKSVALWLLYSKLEEESGLTVKARSVLDRARLAVPNNALLWRESVRLERR
AGNMAQAKAMMARAHREVPKSDVLWAEQVWHLEARTQRKARILEAIKTVDGSPIIFVVAA
RIFWGDRKLEQAQKWFEKAIVRDSDYGDAWAWYYKFLCQHGTEEKQADVVTKCVLNEPRH
GDIWPAVAKKPANAGKSCEEILKLVAEELEQ
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcgacgcgactttctcaaccaggcagcgcccgagaactacgtcgctggtctt
ggtcgtggcgcgacaggttttacgacaagatccgatcttggtcccgctagagacggcccc
agtgaggatcagattaaggaagcgctcgcgaaacgagctgctcaacttggtcttgcgcca
gacaagaagggcaaagacaaggaggaggatgaaggaaacaacgatgaagaacgataccaa
gatcccgataacgaagtcggactctttgccggcggcgtctacgacaaggacgatgaggaa
gccgacaagatttgggaatgggtagatgagagaatggaccgaagaaaaaagcagcgagaa
gcgcgcgagcaggccgagcaggacgaatacgaacgaaacaaccccaagattcagcaacag
ttttccgacttgaagcgagcacttgccaccgttacagacgacgaatgggcgaaccttcca
gaagtcggagatttgacaggaaagaaccggcgtagcaagaaggcactgcgggagagaatg
tatgctgtccctgacagcgctcttgcggcagcgcgcgatgcgggtcagatgggaacaact
gttatggacgaggacatggcaccgagtgccggcggcggcgatgcagcagatggcaccatg
accaactttgccaagatcggagcagctcgcgacaaagtgcttaagtccagactggaacag
gctggtagcgattcggttgctccaggcacctcgaccagtatcgatccacaaggctatctg
acgagcctcgataaaaataaagcagctacaggcaatccagaaggcaacgtcggagatgtc
aatcgtgtgcgcgaactcttgcagtcagttgtcaagaccaacccttcaaatgctttgggt
tggatcgcagcggcacgactggaggagttggcaggcaagactgtgacagcacggaagacc
atcgacaagggttgtgcacagtgcccaaaaagcgaagatgcatggctggagaacattcga
ctcaacgagggctcacccaatgccaagatcatcgcgcgaagagctattgaagccaacaac
agctcagtcagactatgggtagaagccatgagactggaggtgatcccaagcaacaagaag
cgagttattcgacaggcgcttgaccatattccggagtcggaagctctgtggaaggaggct
gtgaatctggaagagagcgtcgatgacgccaagcttctcttggccaaggcgacagagctt
attcccctttctattgatttatggctggcattggcacgtctcgagacacccgagaacgcc
caaaaggtcctcaacagggcgcgaaaggcttgtcctacttctcacgagatttggattgca
gctgcacgtctacaagaacagcttgggcaaggaaccaaggtcaacgttatcaagcgtggt
gtccaggttctggctaaggaatctgccatgcccaagcgtgaagaatggattgccgaggct
gaacgctgtgaagatgaaggcgctatcatcacttgtcagaacattatccgtgaaactctg
ggctggagtttggacgaggacgacgatcgcaaagacatatggatggaggatgcaaggtct
agtatcaaccgaggcaaatacgagacagcaaaggcaatctacgcctacgccctccgagtg
ttcgtcaacagtaggacgatgtggatggcagcagcagacctggagaggaaccacggtacc
cgagactctctctggcaggtattggagaaggccgtcgatgcatgccccaagagtgaggat
ctgtggatgatgctggccaaggagaagtggagggctggagagttggacggtgctcgtctc
gttctcaagcgcgcctttaaccaaaaccccaataacgaagatatttggctctctgctgtt
aagcttgagtctgagagcggtaacgaggagcaggcgcgcaaacttctggagattgctcgt
gaacaagcccccacagatcgtgtgtggatgaagagtattgtatacgagcgagtgctgggc
aatatcgaggcagcacttgaccttgtcctccaggcactccagttgttccctgcatcgcca
aagctctggatgctcaagggccagatctacgaggatctaggcaagattggcccggcgaga
gaggcctatgcaactggtgtcaaggctgtaccgaaatcagtagccctgtggcttttgtat
tccaagttggaggaggaaagcggccttaccgtcaaggctcgatctgtgcttgaccgtgct
cgactggcggtaccaaataatgcgctgctgtggcgtgagtcagtgcgacttgaacgacga
gctggtaacatggcgcaggccaaggcgatgatggccagagcgcaccgagaagttcccaag
agtgatgtcctctgggcagaacaggtctggcatctggaagcacgcacacagcgcaaggct
cgtattcttgaggctatcaagactgtggatggtagtcctatcatctttgttgtcgcggcg
cgcatcttctggggcgatcgcaagctagaacaggcgcagaagtggttcgaaaaggccatt
gtgcgcgatagcgactacggagacgcatgggcttggtactacaagttcctatgccagcac
ggcacagaggagaagcaagctgatgttgtgaccaagtgtgttctcaatgagcctcgacat
ggcgacatatggccagctgtcgccaagaagcctgcgaatgctgggaagagctgtgaagag
attctgaagctggttgctgaagagctggaacaatag
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