Fusarium graminearum: FGSG_10716
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Entry
FGSG_10716 CDS
T01038
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
fgr
Fusarium graminearum
Pathway
fgr03008
Ribosome biogenesis in eukaryotes
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FGSG_10716
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_10716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_10716
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10716
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_10716
03016 Transfer RNA biogenesis [BR:
fgr03016
]
FGSG_10716
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FGSG_10716
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
FGSG_10716
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
Pre-60S particles
RNases
FGSG_10716
Transfer RNA biogenesis [BR:
fgr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
FGSG_10716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
23557604
NCBI-ProteinID:
XP_011325697
UniProt:
Q4HWE2
A0A1I9FUR3
LinkDB
All DBs
Position
3:<6945267..>6948346
Genome browser
AA seq
980 aa
AA seq
DB search
MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV
HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF
RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL
RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA
DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDK
GVALKPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPALE
IREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQEDRR
EANFKRRKLQNEVNGRGGRQGGPSHPKKINGHENPENGLPLQAVGAYTGRHEQTLTHDMV
VNRSTAPDANVANKSAASVLKAQLQSQKSLSNPKPENPEQESPSALGKRKASSIEEGNSS
VPDAASVSTPSTSAEEGPVDDVRLWEDGYADRYYEKKFHKDPKDIEFRHGVGRAYVEGLA
WVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNISFEKGRVSKPFEQLMSVLPAASRH
ALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKFAWQGVALLPFIEMPRLLAAVQSKYPE
LSAADSARNEMGRDVLIFSEGHESLYDEVLTKFYSKKQGDSKFKLNPKKSDGLSGRVEKK
EGYVPHSELKYPLERNSMPDLDYDRSVSVYYDFPQASQTHKSMLLRGVQLPTPALTQNDI
QDMRSRANRGGRGGFGRGHDRGGYNGPGMTRGSQYNRNQGGYGRGNGHYPPAPASHVPPP
PGAPGFGIGVPPPPPPNSYHNQPYDNRYGASSGYNQYRGPPHPANGAPGYHGHGDASSER
GRGSGGYSSRGRYRDNRSYR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcccagcggcttttcgatggctgtctaccagatatcccaagattatatcgcca
gtaatcgaggatcagcctcttgtcatggaagatggttcaacgattcctgttgacaccacc
cgacccaaccccaacggcgaagagtttgataacctctatctcgacatgaatggcatcgta
catccttgttctcatcccgaagatcggccagcacccaaagatgaggaagagatgatgatg
gaagtcttcaggtacactgatcgcgttgtaaacatggtgcgacccagaaagattctcatg
attgcggttgatggtgttgcccccagagccaaaatgaaccagcaacggtcgcgacgattt
cgttctgcacaagaagcacaagagaaagagcaggataaacaagagctcataaagatgctg
aagcaacagaatggtgggaacttgtctaccgaaagcttggaaactgtgacgaagaaggct
tttgattcgaattcgatcacccccggcactcctttcatggacatccttgcactcagtttg
agatactggtgccagtacaagctcaacacggacccaggctgggccaaactaaagatcatt
atttcagatgccacagttcccggagagggagagcacaagatcatgaactttgtccgctcc
caaagagcgtcccccgaccacgatcccaacactcgccatgttatctacggcttagatgct
gatcttatcatgcttggacttgcaacccacgagcctcatttccgagtcttgcgtgaagac
gtattctttcaagatcagaaagcccgcctctgcaagatctgtggccagaagggccacgat
gcgcaaaattgtcgtggcgaggagaagaagaaggacggcgagcatgatgagaaagataaa
ggcgttgctctcaaacctttcatctggttacatgtcgcggtattgcgagagtatttggca
gttgagctgggagtgccgaatctaccctttcgtttcgacttggaacgtgctgtcgacgac
tggatcttcatgtgctgtttcgttggtaacgatttcctacctcatcttccggctctcgag
attagggagcatggaatcgacaccttgaccaagatttggaaggataatctgccagtcatg
ggtggctatgttaccaaggatggccatattgatctcgaaagagctcaggtcatcttggat
ggcctggcgcagcaagaagacaatattttcaaacgacgaaaagaacaagaggatcgacgt
gaagctaacttcaaacgaagaaagctccagaatgaggtcaatggtcgcggaggacgtcag
ggcggtcctagccatccgaaaaagatcaacggccacgaaaatcctgaaaatggtctaccg
ctccaggccgtgggggcatacactggccgacacgaacaaacactgacccacgatatggtg
gtgaatcgcagcactgcaccggatgcgaacgttgctaataaaagtgctgccagtgtgctt
aaagcgcagctccaatcgcaaaagtcgctctccaatccaaagcccgagaatcctgagcag
gagtccccttcagctcttggcaaacgaaaggcgtcgagcatcgaagaaggaaacagttca
gttcctgatgcagccagtgtgtctaccccatcgacctcggctgaagagggccctgtcgac
gatgtgcgcctatgggaggatggttatgccgaccggtattatgagaagaagttccataaa
gaccccaaagacattgaatttcgtcatggggtcggtcgagcgtatgtcgaggggctcgcc
tgggtcttattgtactacttccagggctgtccatcttgggaatggtactacccataccac
tacgcaccgttcgcagccgatttcaaagacattgccaagatgaacatttccttcgagaag
gggcgggtatccaagcctttcgaacagctgatgagtgtcttgccagctgcatcaagacac
gctctacccgaggtctttcatgatctcatgctcaaccccgagagcaacatcatagacttc
tatcctgaagactttgaaatcgacctgaacggaaagaaattcgcctggcaaggagttgcg
ttgcttccgtttattgagatgccacgactcttggcagcagttcaatccaagtacccggaa
ctcagtgcagcagattctgcgcgtaacgagatgggcagagatgttctgattttttcggaa
ggtcacgagagcctgtatgatgaggtcctgactaaattttattccaagaagcagggcgat
tccaaattcaagctgaacccaaagaagagtgatggcctgtcgggcagagtggagaagaaa
gagggttatgttccccatagcgagctgaagtatcctctggaacgaaacagtatgcccgat
ttagactatgacagatcagtcagtgtgtattacgacttcccccaagcatcgcaaacgcac
aagtcgatgctccttcgtggagtgcaactcccaacgcctgccctcacacagaatgacata
caggacatgcggagcagggcgaatcgcggaggtaggggcggctttggtcgcggccatgat
cgaggtggctacaacggacctggcatgacgcgtggttcacaatacaaccgcaatcaggga
ggatacggccgaggtaacggtcattaccctcccgcaccagcatctcacgtccctccacca
ccaggagcccccgggttcgggattggagtgccacctccgccaccaccaaacagctaccac
aatcagccatatgataaccgatacggagcctcttcaggttacaaccagtacagaggccct
cctcacccagccaatggtgccccagggtaccatggccatggcgacgcttcttccgaaaga
ggtcgaggctcaggaggctacagttcccgaggccgttatcgagacaatcggtcgtatagg
tag
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integrated database retrieval system
