Fusarium graminearum: FGSG_10757
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Entry
FGSG_10757 CDS
T01038
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_10757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_10757
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_10757
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FGSG_10757
Spliceosome [BR:
fgr03041
]
Complex A
U2 snRNP components
U2 related factors
FGSG_10757
Complex B
FGSG_10757
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FGSG_10757
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
90S particles
Helicases
FGSG_10757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
23557641
NCBI-ProteinID:
XP_011325648
UniProt:
I1S1X9
LinkDB
All DBs
Position
3:complement(6819180..6821575)
Genome browser
AA seq
768 aa
AA seq
DB search
MSEFMGGKRSSADADESTRKKAKKEGGDDEKYNPYLAHMHDNGDSNGKSQEPSPDSPLAG
MKRQQTTAKQAAKAEDSESNPFTGRPHSQKYFQILQSRRDLPVTKQRQEFLDKYHSTQIL
VFVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEV
GYSIRFEDMTGPQTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLK
QISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIR
TVLQIHASEPEGDILLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQ
QQRIFDKAPAPLRKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVES
LLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELK
KLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVML
ISSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFK
GQATSDPNSAKQWCHEHFLSFRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIR
RALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRT
CTGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttatgggaggcaagcgatcaagcgccgacgccgacgagtcaactcgaaag
aaggccaagaaagaaggtggcgacgacgaaaagtacaacccttaccttgctcacatgcat
gacaacggtgatagcaatggcaagagccaggagccttctcccgactctcctctggctggc
atgaagcgacagcaaaccaccgctaagcaggccgccaaggctgaggattcagagtcgaac
cccttcaccggccgaccgcattcgcagaagtacttccagattctccagagccgtcgcgat
ttgcccgtgaccaagcaacggcaggagtttctcgacaagtaccactcaacgcagattctc
gtctttgtcggtgagacaggttccggaaagaccactcagatcccccaatatgtcgtttac
gacgagctacctcacctcactggcaagctcatcgcttgtacccagccgcgtcgagtcgcc
gccatgtctgtcgcgcagcgtgtcgccgacgaaatggacgttaccttgggtgaggaagtc
ggttacagcattcgtttcgaggacatgacaggtccccagaccatgctcaagtacatgacc
gatggtatgcttctgcgcgaggccatgcacgaccacgagatgtctcgctatagctgtatt
attctcgatgaggctcacgaacgtacccttgcgaccgatattcttatggccctgctcaag
cagatttccatgcgccgccccgaccttaagattatcatcatgtctgctactcttgacgct
caaaaattccagaagtacttcaacgatgcacctttgctcgctgtccctggtcgaacccac
cctgtcgagatcttctatacccccgagcctgagcgcgattacgttgaggctgccataaga
actgttctccaaatccacgcttcggagcctgagggtgatattctgctcttcttgactggt
gaagatgagattgaagacgcttgtcgcaagatcagtcttgaggctgatgagttaatgcgc
gaggttgacgccggtcctctcgctgtgtaccctctttatggtactctacctcctcatcag
cagcagcgcatcttcgacaaggctcctgcacctcttcgcaagggcggtcgccctggccgt
aaggtcatcatttccaccaacatcgccgaaaccagtttgaccattgacggtatcgtctac
gtcgtggaccccggtttcagcaagcagaagatttacaaccctcgtatccgtgtcgagtcc
cttttggtttcgcccatctctaaggcctctgcccagcagcgagctggtcgtgctggtcgt
acaaagcccggaaagtgtttccgactttacacagagaaagccttcaagaaggaactgatt
gagcagacataccccgagattctgcgctccaatcttgccaacacagttttggagctcaag
aagctcggtgtcgaggatcttgtccactttgatcttatggaccctcccgctcctgagact
atgatgcgagctcttgaggagctcaactatctcgcctgtctcgatgatgatggtgagctg
accactctcggtagcatggcctcggcgttccctctggatcccgctctggctgtcatgctc
atctcttctcccgagttttactgctccaacgagattctttccattacctctctgctctca
gtgccccaaatcttcactcgccctgccaacaaccgcaagcgcgcagatgagatgaaggcg
cagtttgctcaccccgatggagaccacctgaccctgcttaacgcctaccacgctttcaag
ggccaggccacatcggaccccaacagcgccaaacagtggtgccacgagcacttcctctcg
ttccgacatctctccagtgccgacaacgttcgcgctcagcttaagcgcatcatggaaacg
catggtctcgagcttgtctcaacgccatttgaggataagaactattacaccaacatccgg
cgtgcactgcttgccggtttcttcatgcaggtcgccatgaaggagagctctggcaagctc
taccgcaccgtcaaggatgaccaggctgtcttgatccacccctcaactgttcttcgcacc
gagtttgactgggtcctttacaacgaattcgttctcacctcaaagcaatacatccgtaca
tgtacaggtatccgacccgaatggctactggaaattgcccccacttactatgacatcgat
agctttgagcaaggcgatgtcaagcgctctcttgcacgcgctgcagagaagaagcgtcgc
aaggaggctatgaaggctggtagatga
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