Fusarium graminearum: FGSG_10795
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Entry
FGSG_10795 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10795
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FGSG_10795
U7-dependent histone pre-mRNA processing factors
FGSG_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF100_C
Lactamase_B_6
Beta-Casp
RMMBL
Motif
Other DBs
NCBI-GeneID:
23557679
NCBI-ProteinID:
XP_011325607
UniProt:
I1S214
LinkDB
All DBs
Position
3:6691449..6694629
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AA seq
964 aa
AA seq
DB search
MFTFCPLQGALSDSSASQSLLELDGGVKVLVDLGWDETFDVEKLKEIEKQVTTLSLILVT
HATASHLAAYAHCCKNIPQFTRIPVYATRPVIDLGRTLIQDLYTSSPAAATTIPQSSLTE
SAYSLTQTATTARNLLLQSPNSEEIARYFSLIQPLKYSQPHQPLPSPFSPPLNGLTITAY
NSGHTLGGTIWHIQHGLESIVYAVDWNQARENVFAGAAWLGGAGGGGAEVIEQLRKPTAL
ICSSRGADRTAQPGGRTKRDEQLIDTIKACVTRGGTVLIPVDSSARVLELSYLLEHAWRT
DAASEGGVLKSAKLYLAGRNMSSTMRYARSMLEWMDDSIVQEFEAFAEDQRRVNGANNKK
EGGGPFDFKYLRLLERKAQIARLLSQNVENAGTEGRVILASDSSIEWGFSKDLIKGLAQD
SRNLVILTDKPGLSKNGNPSIARTLWDWWKERKDGVSVEQNSNGDNIELVYAGGRELEIR
EPQRHALEGDELALYQQWLATQRQLQATQQSGGAAGLEAAADVVDDASSESSSDSEDEDG
EQQGKALNVSTAIAQAGRKNVVLKDEDLGINVLIKKKGVYDFDSRGKKGRERTFPLTIRR
KRQDDFGELIRPEDYLRAEEKEEDGQDSANVEMTDDKLGKKRRWDDVVKSGTGANKRPQA
MRAGSHDGEEAGAGDGFVPDELDTVEDVETEEPVGPCKLSYQTETVQANLRIAYVDFSGL
HDKRSLNMLIPLIQPRKLILVGGERDETLSLAEDCRRALGVDKSNPDNTGSERSVDVYTP
EVGVVVDASVDTNAWVVKLADPLVRKIKWQNVRGLGIVTITGQLLATHLNEAAAADEDVA
NKRQKTEEPPSSTTLTNTAAAIPSATPVLDVLPANLISAVRSAAQPLHVGDLRLADLRRA
MQSAGHTAEFRGEGTLVVDGTVAVRKTSAGRVEVESVGMPTARRSTFYEVRKMIYDNLAV
VAGA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccttttgtccgctccagggcgccttgtcggattcgtccgcttcgcaatccctt
cttgagcttgatgggggtgtcaaggtgctggttgatctgggatgggatgagacttttgat
gtagaaaagctcaaagaaattgagaaacaagtcacgactctatctcttatcctcgttact
catgcgacagcttcgcatcttgctgcttacgcccattgctgcaagaacattcctcagttc
acgcgcatccccgtgtatgcgacacggcctgttattgacctcggccgcacccttatccaa
gacctttatacctcgagtcccgccgctgcgacaacaattccccagagctcactcaccgag
agtgcctattcacttactcaaaccgctacaaccgcacgaaacctcctcctccagtcgccg
aacagcgaagaaattgcccgatacttttctctcatccagccactcaaatactcgcaacct
catcaacctctaccgtcgcctttctcgccacccctcaacggcctaacaattaccgcctat
aattcgggacacaccctcggtggcacaatatggcatatccaacatggcctcgaatcgatc
gtatatgcggtggactggaaccaagcacgtgagaacgtttttgctggtgcagcctggctg
ggaggagctggaggcggtggcgctgaagttatcgagcagctacggaaaccaactgctctg
atttgtagtagtcgtggtgctgaccgaactgcccagcctggaggtcgcacaaagcgagac
gagcagcttatcgacactatcaaggcatgtgtcacccgaggaggaacggtgctgattccc
gtagactcaagcgctagagttttggagctgtcatacctcttggagcatgcttggagaact
gatgctgcttctgagggaggcgtgctcaagtcagctaagctatatctagctggtcgaaat
atgtcgagcactatgcgatatgctagaagtatgcttgaatggatggacgatagtatcgtg
caggaattcgaggcttttgctgaagaccaacgaagggtcaatggcgcaaacaacaagaag
gaaggtggtggaccgttcgacttcaaatatttgcgactgctcgaaagaaaggcccagatc
gcacgattgctcagtcaaaacgtggagaacgctgggacagaaggccgtgtgattctggcg
agcgatagcagtatagaatggggtttctctaaggatttgattaagggattggcgcaagat
tcaaggaacttggtcatcctgacagataagccgggtctgtcaaagaatggcaacccttct
atcgcaagaacgctatgggattggtggaaagagcgcaaagacggtgtatcggtggagcaa
aacagtaacggagacaacattgagctcgtttacgccggtggacgagagctggagatccgt
gagccccagcgtcatgctctggaaggagatgaactggctctctaccagcagtggctcgcc
actcaaagacagcttcaggcaacacaacaaagtggaggtgcagcaggactcgaggcagca
gcagatgttgtggatgacgcttcgtccgaatcatcgtcggactcggaagatgaggatggt
gaacaacaaggcaaggcgcttaatgtatcgacagctattgctcaggccggccgcaagaat
gtcgtactgaaggatgaagacctcggcatcaatgtgcttattaagaagaagggcgtctac
gactttgattctcgagggaagaagggccgagagcgcacattccctctcaccattcgaaga
aagcgtcaagacgacttcggagagcttattcgccctgaagactatctccgtgctgaggag
aaagaggaagatggtcaagatagcgccaacgttgagatgactgatgacaaactcggcaag
aagcgtcgatgggatgatgttgtgaaaagtggcactggtgccaacaaacgaccgcaagcc
atgcgggctggttctcacgatggtgaagaggctggagcaggtgacggctttgttcctgat
gaacttgacactgtcgaggatgttgagactgaagagcctgtgggaccatgcaagttgtca
tatcagacagagactgtccaggccaacttgcgcatcgcatatgttgacttcagcggtctg
cacgacaagcgaagtcttaacatgctaatcccccttatccaaccccgaaagctcattctt
gttggtggtgaacgcgacgagacactttctcttgctgaggattgccgccgagcattggga
gttgacaagagcaatccggacaacactggcagcgaacggtccgttgacgtatacacaccc
gaggttggcgttgtcgtagacgccagtgttgacaccaacgcctgggtcgttaaactggcc
gatcctctggtcagaaagatcaagtggcagaacgttcgtggtctgggcatcgtcactatc
acagggcagcttcttgcaacacatctcaatgaagctgcggcagcggatgaggacgttgcc
aacaagcgccaaaagaccgaggagcccccctcatcaactaccctgaccaacacggcggca
gctatcccctcggccacgcctgttctcgatgttcttcccgcaaaccttatttctgctgtg
cgctcagcagctcaaccactgcacgttggtgaccttcgtcttgccgacttgcgccgcgcc
atgcagtccgccggtcacacagcggagtttcgtggtgaaggtacactggttgttgacggc
actgtcgccgtccgcaagacatccgcagggcgcgtcgaagtcgagagtgtgggcatgccg
accgctcggcgaagcaccttctacgaggtgcgcaagatgatatacgataatttggcagtt
gtcgccggcgcgtag
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