Fusarium graminearum: FGSG_10830
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Entry
FGSG_10830 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03015
mRNA surveillance pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_10830
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_10830
03015 mRNA surveillance pathway
FGSG_10830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10830
03041 Spliceosome [BR:
fgr03041
]
FGSG_10830
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FGSG_10830
TREX complex
FGSG_10830
Spliceosome [BR:
fgr03041
]
Complex C
Other components
EJC/TREX
FGSG_10830
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FGSG_10830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
FoP_duplication
RRM_PARP14_3
Peptidase_M35
Motif
Other DBs
NCBI-GeneID:
23557712
NCBI-ProteinID:
XP_011325564
UniProt:
I1S246
LinkDB
All DBs
Position
3:complement(6562439..6564564)
Genome browser
AA seq
253 aa
AA seq
DB search
MSGKLDQALDDITQAQRRGARRRSNPRRAAGRPAAAAPIGGIQKNTKPARGSGAKPAPAK
AAPTNSDSKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSD
GASKAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPTAKSLAERTSQPKAQAKAQPKSAAA
DKHNAGAAKGAAKGAANKKRRGRSSRPAKKTQEELDSEMADYFVAPAAEAAGNTPAPAAA
PAPTADADMDEIA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagctcgaccaagctctcgacgacatcacccaggcccagcgccgtggtgct
cgccgtcgctccaaccctcgccgcgctgccggacgccctgctgcggccgctcctatcggt
ggtatccagaagaacaccaagcccgcacgcggttcaggcgcgaagcccgctccggccaag
gccgctcccaccaacagtgacagcaagatcattgtgagcaatctgcctaaggacgtctcg
gagcagcagattaaggactatttcatccagtccgttggacctatcaagcgagtagagctt
gtctacggccccaactcacagagccgcggtgtcgccaacgtcaccttccacaaatccgat
ggcgctagcaaggccttccagaagttgaacggtcttctcgttgacaaccgaccgatcaag
attgagatcgtcgtcggagccgcccaggctgacaaggtcattcctaccgccaagagcctc
gctgagcgtactagccagcccaaggcccaggccaaggctcaacccaagtccgctgccgct
gacaagcacaacgctggtgcggccaagggagccgccaagggagctgctaacaagaagcgc
cgtggtcgcagcagccgtcccgccaagaagacacaagaggaactcgactcagagatggct
gattactttgtcgcccctgccgctgaggctgccggcaacactcctgctcctgctgccgcg
ccagctcccactgctgatgctgatatggatgagattgcttaa
DBGET
integrated database retrieval system