Fusarium graminearum: FGSG_10865
Help
Entry
FGSG_10865 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_10865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10865
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FGSG_10865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
23557745
NCBI-ProteinID:
XP_011325524
UniProt:
I1S279
LinkDB
All DBs
Position
3:complement(6445857..6447980)
Genome browser
AA seq
620 aa
AA seq
DB search
MAATTVRKSPYKDFLQPALHRRFTSTATVLLIVSYLQAIILDSWSSYFWAWFPIGPAGFR
TAFIFTCGLAIVVLRIANYHVGLRTTGSGFQTLQTTVTQLKTYETLFWYGFSSLLFSHVF
LWSMHSTANLSWITYFHGDRARLNERPLFLLAYMISCAITQTFNHYRRDTDRLVLGLSKG
KNEKQPDALKLVYQAIPHTFSDSVAGAAAALPVALILYYAILRSFIWGWALMFLRIFYNL
PKTNMLPPSWPSDLWLLFRCMEAGTLIHLIWNIGNFAFSSFMVKAPLKNGKPLTSESKDP
NSSLLNGLKSKKLSIKAFAMWELAYIAQGFDTRRQAIYEDIDRKDGPMWSQVYSICLDVI
KSIETRVDTYGKAPDAPLAAPAAEPKQRVSTPLRDDPIFNNRAAPRTMRSEVEKRLSQVA
RSPGESPASKLSPIAKKTWKEAKDRVLTKEQQELVTPEHLKGQFEQWTLQLMEVDAIAAL
FQQRFRTQFAAAVLGTPYAEPTLCINAIHVLHHLSVHSLTEDQFGNVHRDVPGIIRTFTS
VIKKLEAFRIEFPLHWTDVSCKRVSPEVEKVMDALKTALKQVLANFEPYSSDLRLTLSDI
RLAKEACADAKNSEMTQVQS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccaccgttagaaaatccccttataaggacttcctgcagccagctctgcat
cggcgcttcacctcaacagctactgttttgctcattgtatcctatcttcaagctatcatc
ttggacagttggagttcttacttctgggcttggttccccattggtccagctggcttccga
actgccttcattttcacatgtggcctcgcgatcgtcgtgctccgaatagcaaactaccac
gttggcctacgtaccaccggctccggcttccagactctccaaaccaccgtcacgcaactt
aagacgtacgagactttgttttggtatggcttttcaagcttgctcttcagccatgttttt
ctttggtcaatgcattctacggcaaacctatcctggatcacctacttccacggagaccgg
gcgaggctgaacgagagaccgctcttcctgttggcatacatgatttcgtgtgctattaca
caaacatttaaccattaccgaagggataccgatcgcctggttctcggattgtcaaagggc
aaaaacgagaagcagcccgacgcgctgaagctggtgtaccaggcaatcccacacactttc
agcgattctgtcgcaggcgctgctgctgcacttcccgtcgcgttgatactatactacgcc
attttgcgatccttcatctggggctgggcgctcatgttcttacgcatcttttataatcta
ccaaagaccaacatgctcccgcctagctggccaagcgatctttggctcctgttccgttgt
atggaggctggaacattgattcatttgatctggaacattggtaactttgctttctcttct
ttcatggtcaaggcgcccctgaagaacggtaagcctcttacctctgaatccaaggacccc
aacagcagtcttttgaacggactcaagagcaagaaactctctatcaaggcgttcgccatg
tgggagctcgcatatattgcccaaggctttgacactcgccgacaagctatttacgaagac
atcgatcgcaaggacgggcccatgtggtctcaggtttattccatctgtctggacgtgatc
aagtccatcgagaccagagtcgacacatacggcaaagctcctgatgcgcctctggctgca
cccgccgcggaacccaaacaacgggtgtctactcctctccgggacgatcccattttcaac
aaccgagcggcgcctcgaacgatgcgaagcgaggtcgagaagcgcctaagccaagtcgca
cgatctcctggcgagtctcctgcctcgaaattgagcccaatcgccaaaaagacttggaag
gaagccaaggatcgagtcttgaccaaggaacagcaggaacttgtcactcctgagcacctg
aaaggtcaatttgaacagtggactctgcaactgatggaggttgacgccattgccgcccta
tttcaacagcgcttccgaacccaattcgccgccgcggtgcttggaacgccatatgccgaa
cctacgctttgtatcaacgcgattcacgtactccaccacctctcagtgcacagtttgaca
gaggatcagttcggaaatgtgcatagagacgtgcccggcatcatccgaactttcacatct
gtcattaagaagctggaggctttccgtatcgagttcccacttcactggactgacgtgtcg
tgcaagagagtgagccctgaggtggagaaggttatggacgctttgaagactgctctgaag
caggtgctggccaattttgagccttacagcagcgatcttaggttgacgctgtctgatatt
cgcttggctaaagaggcttgtgcggacgcaaagaattccgagatgacacaagtccaatca
tga
DBGET
integrated database retrieval system