KEGG   Fusarium graminearum: FGSG_10875
Entry
FGSG_10875        CDS       T01038                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
fgr  Fusarium graminearum
Pathway
fgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FGSG_10875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgr03019]
    FGSG_10875
Messenger RNA biogenesis [BR:fgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FGSG_10875
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FGSG_10875
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 23557755
NCBI-ProteinID: XP_011325512
UniProt: I1S289
LinkDB
Position
3:6413777..6414606
AA seq 169 aa
MENLSITDAPPQGRGAPQPLPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWD
QFANLVLQSTIERIFAPSPDSAGSDRPTGLYADINHGIFLVRGENVLLLGEIDLDRDDDP
PPGFELAELEVVKKIAEEKKAADKARDKLRVKKLAKHGFEGENIGEIVL
NT seq 510 nt   +upstreamnt  +downstreamnt
atggagaacctatctatcaccgatgcccctccacagggtcgtggtgcgccgcaaccccta
cctcagctgccgccgcaaatgtttacgactgctgcgcagctcctggacctcacagacaag
aagctcatggtcgctttgcgcgatgggcgaaaactcattggagtactaagaagctgggat
caattcgcaaatcttgttctccaatccacgatcgaacgtatttttgcgccctctcccgac
tcagcaggtagtgatcgaccaaccggcctgtacgcagacataaatcacggcatattcctc
gtccgaggcgagaacgtactactccttggcgaaatcgacctcgacagagatgacgatccc
ccgcctggtttcgagctggccgagttggaagtggtcaagaagatcgcagaggagaagaag
gcagccgacaaggctcgggataagttgcgggtgaagaagctcgcgaaacacggcttcgag
ggggagaacattggcgagattgtgctgtag

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