Fusarium graminearum: FGSG_11760
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Entry
FGSG_11760 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_11760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_11760
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_11760
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FGSG_11760
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
FGSG_11760
U7-dependent histone pre-mRNA processing factors
FGSG_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
23558579
NCBI-ProteinID:
XP_011316062
LinkDB
All DBs
Position
1:1275230..1277366
Genome browser
AA seq
584 aa
AA seq
DB search
MTATLSVSDQIRQLDDARKLVLGDVKYYPSVVKGILPIIGPSAPLELRRWGAEFLAEAFA
TPALPNGEKETMQPYVLPTLESLLENEREDPQVLRSVIQCVASIYPLAMRWIINNGYDTI
TWERMVAVKQKVLRIWDNAGPTYGGTLDVSLDKVPSNHQSLDPRNLEAEASGLLDRMLGA
LLESSDALIVDATLNCMSIIIRARPATSNRIINALLGFNPLKLANSPLTPKSRVMIRSME
KTTRMLLIHLVKRDPHNPMVPRIQQHVERMMRTMADIFDNSGHKRPLEPPPQDEYEAKRP
RLSPAQIQIPPLGPSPHSLADIFTLIDNSALKNFDISQVPAPLVARIAVTTLARLDPQVL
SKAVDGIRGRLDTLASAPVPELNPNTAPLGVEEDDDDYEPDFYQAEDTEQILNKLDSSPT
HEAPLLDDGLALKSFHLHQPSALTPEAALTAGNGTVTRVIEMMKSMEEPAKKSKAGFSRL
AASSGNRDSWMTILARLATRSVAGLEETTIKDEDGSLTHQSLSSNIRDVLYSYVMEDFRK
HIDVAVSWLCEEWYNDKLQQKKGGDRPLYYEKCCLRLIDGGRDT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacactttctgtgtcggaccagattcgacagctcgacgatgcacgaaagctg
gttttgggagacgtcaaatactaccccagtgtcgtcaaaggaatactgcccatcattgga
cctagcgcaccactcgagctgcggagatggggcgccgaattccttgctgaagctttcgcg
acgccagctttaccaaatggagagaaagaaacaatgcaaccttatgttttaccaacattg
gaatccctgcttgagaatgagcgagaggaccctcaagtcctgcgcagtgtgattcaatgc
gttgccagtatttatcccttggcgatgcggtggatcataaataacggttacgacacaatc
acttgggaaagaatggtggctgtgaagcaaaaggttttgagaatatgggacaatgctggt
cccacctatggcggtacgctcgatgtttctctggataaagtcccttcgaaccaccagtcc
ctggaccctaggaatctagaggctgaggcgtcggggcttttggaccgaatgctgggcgcc
ctactggaaagcagcgatgctttgattgtagatgcgaccttgaactgcatgtctatcatc
ataagagcgcgtccagctacatcaaatcgaatcatcaatgccctccttggctttaacccc
ctcaagcttgccaactccccccttacaccaaagagccgggtcatgatcaggtcgatggag
aagacaactcgcatgctactgattcaccttgtaaaacgagatccccacaacccgatggtc
cccagaatacagcagcacgtagaacgtatgatgcgtaccatggccgatatttttgacaat
tctggacacaagcgcccccttgaaccgccacctcaagacgagtacgaggccaaacggcca
cggctgtctccagcgcaaatccagattccacccctgggtccaagcccgcacagtctagcc
gacattttcacccttatcgacaacagtgctctcaagaactttgatatttcgcaagttccc
gcgcccctggttgccagaattgccgtcacaacactggcgaggctagatccccaagtactg
tccaaggcagttgacggcatccgtggccgcctcgatacccttgccagtgctccagtacct
gagctgaatcctaacacagctccgttgggtgtggaagaagacgacgatgattatgaacct
gatttctatcaagcggaggatacagagcaaattcttaacaagctagatagctcgccgacc
catgaagcaccattgttggacgatggtcttgccttgaagtcattccacctacaccagcct
agtgccctgacaccagaagcggcattgacagcaggcaatggcacagtgacccgggtcatt
gagatgatgaaatctatggaagaaccagcaaagaaaagcaaggctggtttcagcagactg
gcagctagctctggcaaccgggactcgtggatgacaattctagcgcgactcgctactcgc
tccgtggctggtctggaagagacgaccatcaaggatgaagacggctcgctaacacaccaa
tccctcagcagcaatattcgcgacgtcctatattcctacgtgatggaagacttccgcaag
cacattgatgtagcagtctcttggctctgcgaggagtggtacaacgataagctgcagcag
aagaagggcggcgatcggcctctatactacgaaaagtgttgcctgcggctgattgatggt
ggtcgagatacctga
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