Fusarium graminearum: FGSG_11865
Help
Entry
FGSG_11865 CDS
T01038
Name
(RefSeq) mRNA 3'-end-processing protein yth-1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_11865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_11865
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_11865
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FGSG_11865
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FGSG_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
GRP
Motif
Other DBs
NCBI-GeneID:
23558684
NCBI-ProteinID:
XP_011316696
UniProt:
Q4IPA4
A0A1I9EX64
LinkDB
All DBs
Position
1:3141864..3142631
Genome browser
AA seq
255 aa
AA seq
DB search
MPSAVESPADAILNHSATSYNFRFSPFLRQTYQVGLSPDRPVCKAFQSGHCPNGTRCPER
HVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGD
ECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVRRKLCVFYLAGFCPDGPDCKEGAHP
KWSKDLEKPTLKSEEKKDEEMRVEFSQDDMDRQRDQQRDRDRDDGGRHRGGHGGHGGHGG
RGKWRGRGRYRARGH
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgccgtcgaatctcccgccgatgccatcctcaatcactctgcaacgtcctac
aacttccgcttctcacccttcctccgacaaacctaccaagtcggcctctcccccgatcga
ccagtatgcaaagccttccagtccggccattgcccgaatggtacgcgatgccctgaacga
cacgtttccgactctaagacgtcgcaaccgactggcggtctcaactcgctcgtgtgcaaa
cattggctgcgcggcttgtgcaaaaagggcgagcactgcgagttccttcacgagtataac
ctacgaaagatgcctgagtgtaactttttcatgagaaatggatactgctccaatggcgac
gagtgcctatatcttcacatcgatcctcaaagtcgacttccgccttgtcctcactacgat
atgggattctgtcccctcggccccaactgttctaaaaagcacgtgcgtaggaagctctgt
gtcttttatctagctggtttctgtcctgatggaccggattgcaaagagggcgctcatcct
aaatggtcaaaggatcttgagaagccaaccctcaagtcggaagaaaagaaggacgaggag
atgagagtggaattttcccaggacgacatggacagacagcgcgaccaacaaagagacaga
gatcgggatgatggaggaagacaccgaggaggtcacggtggccatggaggacatggtggc
agaggaaaatggcgaggaagaggtagataccgtgctagaggccactaa
DBGET
integrated database retrieval system
