Fusarium graminearum: FGSG_12263
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Entry
FGSG_12263 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
fgr
Fusarium graminearum
Pathway
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FGSG_12263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_12263
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_12263
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FGSG_12263
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
FGSG_12263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
23559078
NCBI-ProteinID:
XP_011321218
UniProt:
I1S5Z2
LinkDB
All DBs
Position
2:<4194265..>4196181
Genome browser
AA seq
596 aa
AA seq
DB search
MSGDSAEVAEDYRLALEDLSSNLRFEISNLTVIARENTEHALAIAEVLQQHILKAAPSKK
LPALYVLDSIVKNVGTPYTLYFGRNLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVPGSM
DSRPVFSHELVRPIENALLKARAATMPQAGMMPGRPRSAVPHRDTPTPPGMRFPPGHPAQ
QYTSNGGQSLSNDIRNLIVTTQAEASRNPHDHGVQTRLRALHDLQVVVNSTSLPPDQLEL
IKNKVTELAAVNMMAPLTQRPAPTPPVPVQARPIPMLPVSVALPQPAAPAPAQEGVTLDA
LLGKGALAALMARQSATPQNSTPTPQLTPVQHEPPKPPMPTMSALEAMMSMPPMSATPTI
PAASTPVPPPASAAPWSLLDQLRKSGLLPPAPASASAPVQQGGINLAALKQPCQPSLIRQ
LHNDLGQPCTQCGRRFRDDEAGKKKKIAHMDWHFRVHQRTNEAEKRGMHRSWYVDQGEWL
KSREVVDVDHVPTAEDVAAQASKASEAAKPKYIPVPDPSRGINPVCPICQDRFENKWLDT
AQEWVWLDTVLVGNRAYHASCHAEATRDRENTPVLGKRKAETSIASPKVRSLKTSA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagactctgctgaggtggcggaggactatcgcctcgcgctggaagacctctcc
tctaatttgcgcttcgagattagcaacctgactgtcattgctcgcgagaatactgaacac
gccctagcgatcgcggaagttttgcagcaacacatcctcaaggcagctccaagcaagaag
ctcccagctctgtacgtactagactcgatcgtcaaaaatgttggcactccatacactctc
tacttcggtcgcaatcttttcaaaacctttatggaatcatacgctgtagtcgatcaacct
gtgcgtcggaaaatggaagagatgcttaggacatggaaggagcctgttcctgggtctatg
gacagcagacctgtgttttctcacgagttggtgcgacccattgagaatgcactcttgaag
gcacgcgccgctaccatgccccaagcgggaatgatgcctgggcgaccgcgatctgctgtg
ccccatcgtgataccccgacaccgcctggaatgagatttccaccaggccacccagctcaa
caatacacatcaaatggaggacagtcattgagcaatgacattcggaatctaattgttacc
acgcaggcggaagcctcaaggaacccacatgatcatggtgttcagactagattaagagca
ctccatgacctgcaggtcgttgtgaacagcactagcttgcccccggatcagcttgagctc
attaagaacaaagtaactgaacttgctgccgtaaacatgatggcgcctctgactcaaagg
cctgcgcctactcctcctgtgcctgtccaagcacgccctatccccatgcttccagtgtcc
gtagctcttcctcagcctgcagctccggctccggcgcaagaaggtgtgacgcttgacgcg
ctcttgggtaagggagcgttggcagcactgatggcaaggcaatcggccactcctcaaaac
tctacacctactccgcagctaacccccgttcaacatgaaccaccaaaaccaccaatgcct
acgatgtctgcgttggaagccatgatgtctatgccaccaatgtcagcaacaccgaccata
ccagcagcatctacaccagtcccaccgccagcatcagcagccccatggagtctgcttgat
caactacgaaagtcaggtttgctcccacctgcacctgcgtctgcgtctgcaccagttcaa
caaggtggcatcaacctggctgctttaaagcaaccgtgccaaccttctttgatccgtcaa
ctacataacgacttgggccagccatgcactcagtgtggtagacgatttagagatgatgag
gctggcaagaagaagaagatcgcccatatggactggcatttccgtgtacatcaacgaacc
aacgaagccgagaaacgaggcatgcaccgaagttggtacgttgatcaaggcgaatggcta
aagtcaagagaggttgtcgacgtagaccacgtcccaaccgccgaggatgttgccgcgcag
gcttctaaagcatctgaggctgccaagccaaagtatattcccgtccctgatccatctcgt
ggcatcaaccccgtttgtccgatttgccaagatcgattcgagaacaaatggctcgacact
gcacaggaatgggtatggctagatacagttctggtcggcaaccgagcatatcatgcttca
tgtcacgcagaagcaacccgagatcgcgagaacacgccagtgttaggcaaaagaaaagcc
gaaacaagcattgcgtcaccaaaagtccgatctctcaagacatcagcttaa
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