Fusarium graminearum: FGSG_12577
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Entry
FGSG_12577 CDS
T01038
Name
(RefSeq) pre-mRNA-splicing factor slt-11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_12577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_12577
Spliceosome [BR:
fgr03041
]
Complex B
Other components
Prp19-related factors
FGSG_12577
Complex C
FGSG_12577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_YTH1
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
23559390
NCBI-ProteinID:
XP_011323030
LinkDB
All DBs
Position
2:complement(<8687054..>8688810)
Genome browser
AA seq
320 aa
AA seq
DB search
MQHNLYATRANGRKKRTNICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMVAPGPQSD
INREYFAQNNEQLIEEGKVGQEEYEKTDEKARELLRRLANSKPYFRKGRTIEEGESSKSG
SAAVGAGLGGPGPIRTRDSKAAAAAGAKPGGKGRQVFPSAAQLPPSPRDWQPPADKSIMS
LFVTGIEDDLPEYKLRDFFKAHGKIKSLVCSHMSHCAFVNYETREAAEKAAEACQGRAVI
AGCPLRVRWGQPKAIGTMDKDQRSQMLRDARQRQGGSQGQGSRAAEGTGESTNRPAALPA
PVAAPPGASDTPAYAALSGD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataatctctacgccacgcgcgccaacggtcgcaagaagcgaaccaacatttgc
ctaacctgcgcgaggctcaagaactgctgccaatgttgcatgctcgatctctcctttggc
cttcccatcgtcgtacgcgatgccgctcttaagatggtcgcccccggccctcagtccgac
atcaaccgagaatactttgctcaaaataacgaacaattgatcgaggagggaaaggtcgga
caagaggaatacgaaaagacagacgagaaggcgcgtgagctgctacgaagactcgccaac
agcaaaccctatttccgcaaaggaaggactattgaggagggtgaaagctctaagagcgga
agcgcagctgttggcgctggcctcggcggacctggccctattcgaacgcgagattccaag
gctgccgcagcagcgggagctaaacccggtggtaagggtcgccaggtgttcccaagtgct
gcccagttgcctccgagtccacgcgactggcaacctcccgccgacaagagtattatgtcg
ctttttgtgactggtatcgaggacgacctacccgagtacaagcttagggatttcttcaag
gcacacggcaagatcaagagcttagtctgctcacacatgtcacattgtgcctttgtcaac
tacgaaactcgagaggcggccgagaaagccgcggaggcatgtcagggtcgagctgtgatt
gctggatgtccgctgcgggttcgatggggacaaccgaaggcaattggtactatggataaa
gaccaaagaagtcagatgctgcgtgacgccagacagcgccagggaggttctcaaggtcaa
ggctcacgagcagcggagggcactggcgagtctactaaccggcctgcggctctccctgcc
cctgtggcagcacctcctggagcttctgatacccctgcctacgctgctctttccggagac
tag
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