Fusarium graminearum: FGSG_12776
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Entry
FGSG_12776 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_12776
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_12776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_12776
03041 Spliceosome [BR:
fgr03041
]
FGSG_12776
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
FGSG_12776
Spliceosome [BR:
fgr03041
]
Complex C
Other components
EJC/TREX
FGSG_12776
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FGSG_12776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
23559588
NCBI-ProteinID:
XP_011324223
LinkDB
All DBs
Position
3:complement(3004786..3010074)
Genome browser
AA seq
1607 aa
AA seq
DB search
MAEHTRIINLILHHRNDDLALLTHHHRRPLRQRSRNRLTAWAEGGRDEMIQHGKQSRDDV
DITELSSLFQEFVHSVVEARLSPADAGTCVKEILGDETTEIIKDSYAFAPHTLFLDSLSI
VMDNEPVIYRPTLREFVLTAGISSNLMRQVLDHEVLQQLGLIRDNFVKLGIKQATNLLYR
QANYNLLREETEGYSKLITELFTTSSVAPPPPEMAEQTFERIKALIGTFDLDVGRVLDVT
LDVAAAVLIKQFKFFVKFLRVSSWWPRSHLKFSAAVYVGGLPLWATPEYSQWTTTEEDEK
LLEEKKRVRDVAFWSRAREVHIAAFFELGGRQVADSDSQQLTITNGSPGEDAAADIERQW
VQETKTLPPPGNRTAAQLLGFKLRFYNSDARDESDVLPANLLYLAALLIKIGFISLTDLY
PHLSPADEDMEMVREKEMKKIEEAERTAKGGPMNALLMAGVLPQGDDDNPNGSNLPRREL
PKKTEADAKEAAAEGADSKPKLPEPLEQKVALLTQLLTIGAIPESLFILGRFPWIPEVFP
EVLERIHRVLHYSVDKVFHDSRPIVNYRYYWDEWADNIPVCQTVDDIFTLCGTLLNISGV
NIGKDEVLLTKLARIGAKSLGEDRSEHNLSRWHDLLRRLLLPALSHTKANASAVNAIWEL
MRHYPMTTRYSMYAEWFEGQISRLPAMKAAFAKATSETRGTMKRVSLTNLSEMAKQLAKT
SYSSPGIVFRVAFEQLESYPNLIDAFVECAKYFTDLSYDVLVWSLMSSLGKSRSRTQAEH
ALTTSKWLQALSRFSGRVFRRYTVLNATPVLQYVNDQLIKGNSTDLIILKELITSMGGIV
DSVDFTDHQIMSMAGGEYLRRHTLIRGQDKRFDNIKSSKRLIQALTDSKLAAQLLISLAQ
YRQAALFQVPEDEAHIKYLSSMIDDSHRILIQYLDLLWSNMEPASFDSLVPSIPELINSY
GLDVGLAFMIGRASLAHRMFPWKQKKVEETKEKSQIAQSTDKEGDVTMSDTPVTNGGNDT
PGQETPQADDQTQKSEDSSLIKSALQPLVESIQDAARPETWQKITPDLYVTFWALQLGDL
YCPDRIYRQEKDRLRAEDLAISRDRSDMSRRGQERKVEKRKELMQLQIGLSEECGEHLLR
QAKWKYFLSKQFQSSFPEPRAKPDSISDTLLEQCFLPRLLLSKADAEYTYKFIKALHEGN
APGFQLMSLYDRLFNANRLRSLIFTSTVMEAEYLGRFLRLILEDLSRWHKNATVPNEKDK
SKDQPRLGAYDKEGKGSSDQPRLGFALTFDDNGKPLTFVEHEQFRDMLFRWHKNLNSALR
SCLEGAEWMHIRNAITVLKAVLDFFPAIDFMASKFSSLLQTITKQESTAKPTPDSEIGGR
VDLSVAAQGAMSELQRRKSKWVMVQAFRPGGAGPAQNESEKASLRATAPEFKPGSANPQA
LRRTCYPLSQGRPENPTRPNVTKHLQDLAPQTQVQERDHPGSMILGLIRCLNARLIPSPA
DLMCLSLLTILLIDSANLGAMSVVMVRSLETHAPEIRASLEKLVTHGISETREISTLLVQ
SVLASFLTDDHRSTVESHLDLMEDVAASMSENGPETLRAVEATIMAV
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcacaccagaatcatcaacctaatcctacaccaccgcaacgacgacctggct
cttctcacgcaccaccaccgccgccccctccgccagcgatcaagaaaccgacttaccgct
tgggccgagggcggtcgggacgagatgattcagcacggaaaacaatcgcgagacgatgtt
gacatcactgagctttcgagtttgtttcaggaattcgttcactcagttgtcgaggctcgc
ttatcaccagctgatgcaggtacctgcgtcaaggaaatcctcggtgacgaaacgacggag
attattaaggattcatacgcgttcgctccccacactctatttcttgactctctatccatc
gttatggataatgagcccgttatttaccggccaaccctccgggagtttgttctgacagct
ggcatatcttcaaatttgatgcgccaagtgctcgaccatgaagtcttgcagcagctgggg
cttattagagataatttcgtcaaactgggtatcaagcaggcgacgaatcttctctatcga
caagccaactacaacttgcttcgcgaggaaaccgaaggatactccaagcttatcacagaa
ttattcacaactagcagtgtggcgcctccccctccagaaatggccgaacaaacctttgaa
cgaatcaaggcattgataggtacttttgatctcgacgtcggaagagttttggatgtgact
cttgacgttgcagctgctgtactgataaaacagttcaagttctttgtcaagtttctccgg
gtcagctcttggtggccacgctctcacctcaagttcagcgctgcagtttatgtcggcggc
ttgcctttgtgggccaccccagagtactcacagtggacaacaacagaagaggatgagaag
cttttggaggagaagaaacgggttcgtgatgttgcattctggagtcgagctcgagaagtg
catatcgcggcattctttgagttgggcggccgacaagtggcagattccgactctcagcaa
ctaaccattaccaacgggtccccaggcgaagacgctgcggccgatatcgagcgacagtgg
gttcaggaaaccaagacactaccacctccgggcaaccgtacggccgcgcagctgcttggt
ttcaagctgcgtttctacaactcagacgccagagatgaatcagacgtccttcctgcgaac
ctgctctatctggcagcccttctcatcaagatcggctttatttccctgaccgacctctac
ccccatctctcaccagccgacgaagatatggaaatggtccgcgagaaagagatgaagaag
attgaagaagcagaacgaaccgccaaaggtggaccgatgaacgctcttctcatggctggt
gttttgccccagggcgacgacgataatccaaacgggtcaaatctacctcgacgggagctt
cccaagaaaaccgaagctgacgctaaagaagctgcagcagagggggcagacagcaaacca
aagttgcctgaacccttggaacaaaaggtggcgttgctcacccagttgttgactattggc
gccattcccgaatcgttgtttattctcggccgcttcccctggatacccgaggtctttcct
gaagtgctggaaagaattcatcgcgttcttcactattctgtcgacaaagtcttccacgac
agccgacctattgtgaattatcgatattattgggatgaatgggcggacaatattcccgtc
tgccaaaccgtggacgacatcttcaccctgtgcggaacgctgctcaacatttccggtgtc
aacattggcaaggatgaggtgctattgaccaagttggccagaattggagccaagagtctt
ggagaggacaggtccgagcacaacctcagtcgatggcacgacctcctccgacggcttttg
ttgccagcgttgagtcataccaaggccaatgcttctgccgttaatgcgatctgggaactc
atgaggcactaccccatgactacccgctattccatgtatgctgagtggttcgagggtcaa
atctctcgactgcctgctatgaaggcagcttttgcaaaggcaacatcagagactcgaggc
accatgaagcgagtttctcttaccaacctcagcgaaatggccaagcaactcgccaagacc
agctactcgtctcctggtatcgtgttccgagttgctttcgaacaactggaatcctaccca
aacctgatcgatgcttttgtggagtgcgcaaagtactttacagacctgtcttatgatgtg
cttgtgtggtccctgatgagctctctcggaaagtccaggagtcgtactcaagccgagcac
gccctcactaccagtaaatggttacaagccttgtcaagattctccggtagagtcttccga
cgatacaccgtattgaacgccacgccagttcttcaatatgtcaacgaccagctgatcaag
ggcaactctactgaccttatcattctcaaggagctcatcacttccatgggtggaattgtg
gattcagttgatttcacagaccatcaaatcatgtcaatggctggaggtgaatacttgcga
cggcatactctgatccgcggtcaagataagcgatttgacaacatcaaaagctcaaagcgt
cttatccaggctttgaccgactccaaacttgctgcccagcttctcatcagcctagcacag
taccgacaagcagcactcttccaggtgccagaggatgaagctcacatcaagtacctttcc
tcgatgattgatgactctcaccgtattttgatccaatatctggacctactctggagcaac
atggaaccggccagcttcgatagtcttgtcccttccattcccgaactcattaattcatac
ggtctggatgtcggcctcgcattcatgataggtcgggcaagtcttgcccaccgcatgttc
ccttggaagcaaaagaaggttgaagagaccaaagaaaagtctcaaattgcgcagtctacg
gacaaggaaggggacgtcaccatgtccgacacgcccgttacaaatggcggcaatgacaca
cccggtcaagaaacaccacaggccgacgaccagacacaaaaatctgaagacagttctctc
atcaaatcagcactgcagcctctggtggaaagcattcaagatgctgcccgtcctgagact
tggcagaagattaccccagatctctatgtgaccttctgggctcttcagctaggcgatctc
tactgtcccgataggatttacagacaagagaaagaccgtctcagagccgaggaccttgcc
atctcacgagatcgcagcgacatgtcaagacgaggacaagaacgcaaagtggaaaaacga
aaggagcttatgcagcttcagatcggtctttccgaagaatgcggcgaacacctcctgcga
caggcaaagtggaaatatttcctgagcaagcagtttcagtcttcattcccagagcctcga
gctaaaccagacagcatttccgacacgttgcttgaacagtgcttcctccctcgcctgctt
ctatccaaagctgatgccgagtacacatacaaattcatcaaagcgcttcatgaaggcaat
gctccaggcttccagttgatgtccctctacgaccgactattcaatgccaaccgcttgagg
tctctcattttcacatcaactgttatggaggccgaatatcttggtcgtttcttgaggttg
attctggaagacttgtcacgttggcacaagaacgcaactgtccccaatgagaaggacaag
tccaaggatcagcccaggctcggtgcatatgacaaggaaggcaagggatcgagcgatcag
cctcgtcttgggtttgctttgactttcgacgacaacggaaagcccttgacatttgtagag
cacgaacagttccgggatatgctattccgctggcacaagaacctcaacagtgcccttcgt
tcctgcttggaaggcgcggagtggatgcacatccgaaacgccatcacagttctcaaggcg
gtccttgacttcttccccgcgatcgactttatggcatccaaattctcttcgctccttcag
actatcaccaaacaagagtctactgcaaaaccgacaccggacagtgagattggtggacgt
gtcgacctttcagtcgccgcacaaggtgcaatgtcagaacttcaaaggaggaaatccaaa
tgggtcatggtgcaggctttccgccctggtggtgccgggcctgcccagaacgaatcagaa
aaggcgtctctacgtgcgactgcgcctgagttcaagcctggctccgcaaacccacaggcc
ctgcgaaggacttgctacccgctaagccagggtcgtcccgagaatccaactcggccaaac
gtgaccaaacaccttcaggacctcgcgccgcaaacacaagttcaggagcgggatcatccg
ggaagcatgattctcggcctaatacgttgcctgaacgcccgcctcataccctccccagcc
gacctgatgtgcctatccctgctcactatccttctgatcgattcagccaatctaggagcc
atgagcgtcgtgatggtaaggagcctcgagacgcacgctccagagattcgcgcgagccta
gagaaactcgtgacacacgggatcagcgagactcgcgaaatttcgaccctgctcgtccag
agcgtcctcgcgagtttcctgaccgacgatcacaggagcacggtagagagccatctcgat
ctgatggaggacgtcgcagcgagcatgagcgagaacggccccgagacactaagagcagta
gaggccacgatcatggccgtttga
DBGET
integrated database retrieval system