Fusarium graminearum: FGSG_12904
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Entry
FGSG_12904 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_12904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_12904
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FGSG_12904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_16
TPR_1
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_7
ANAPC3
ARM_TT21_5th
ARM_TT21_N
TPR_6
ARM_TT21_C
ARM_TT21
TPR_Slam
TPR_4
TPR_10
RPN6_N
DUF7017
Motif
Other DBs
NCBI-GeneID:
23559714
NCBI-ProteinID:
XP_011324976
UniProt:
I1S7S9
LinkDB
All DBs
Position
3:complement(4998606..5002941)
Genome browser
AA seq
1421 aa
AA seq
DB search
MSGTKAALKGINDAIRQQKFDDAVSKARDLLEKDSKNYQAHIFLAFALDKQDRLDQAQET
YRSATWLRPQEAQAWQGLIKLCEKQNNKKLTDYHQAVVNLAQIYRDADDMYKAQDVVDKF
VDFARVKGDDIQYAEALSIQLPESPLYPVLEGRFPHPARTYETVAIILEKYEKHRINTLI
GERRTKLGAKLSEVTLDAKREVYSQSKLEHIYRQLINWTSDDDLRRQYEEKLLQLCYDRL
LVAPTGAEKDTERQKVLELANGMVAIKYPYKLAWDISIEWQDKKEVREWDVDVLRAYCSF
FPDSDLYKVITSYLTSPISPFPPEKAQEKAKAAPSDTEESSDDDDGGVPTLVVPLTDEDR
LIMISEGIITADSVFAYRLTGQYLLHIGEYESTVELMRKGMALLAQERKKTGLAFINAED
SYYLSLGTALVYYQSPRHHKEAKELFDKVLERDTTSTSALIGVGLIYEEEEEYDEAIDYL
TRALERDQTNMKVKSEAAWVKALKGDWQTAKDELQECIELLEKQGTTSKELLGETQHRLG
VCIWNIDTSKAARKQRKGESAYAYWLSALSNHLNHAPTYTYLGAYYADYAKDKGRSRRCF
QKALELSHAEVVAAERLARSFADDGDWDRVELVARRVVDSGKVKPPPGSKRKGISWPFAA
LGVAELNKQDFHKAIVSFQAALRISPEDYHSWVGLGESYHSSGRHVAATKAILNAQKLEE
DTEADISGDTWFTKYMLANIKRELGEYDESVALYRSVIETHPEEEGVIIALLQTTVDSAL
SSVEKGLFGKAIQLATETIEYAKTTSGSVFETFNFWKAIADACSVYSSVQSRTKDFPSDS
IRSILEKGSQDAYEIFASIDKVGTDVVFAQGLYADDEQPGVDLTRCIHATILCHKQGVHI
ASNDRHAQSVAYYNLGWAEYRAHICLPPEIRKKSSSYIKAAVRSFKRAIELEAGNSEFWN
ALGVVTSEINPSVSQHAFSRSLYLNERSPAAWTNLGTLALLSGDVKLANEIFTRAQSTDP
DYAHAWLGQGFVALLHGEAKEARGLFTHAMEIADASSVPTRRHYPSSLFDHILTVSPNDV
NVESLIQPLFALNQHQSLKSQDLAFAHLATLFQERTNESGRAVETLEKISSTIEADYEST
ESPQSLAKFALAKTDLARTYLASGSYDKAVECGELALGLSSDEAENELSSDQRKKARLSA
HLTVGLAEYYRNRFDEAIKYFESALEESDGNPDAVCLLAQVLWAQGSEASRDRAREELFA
VIEKQPEHVQSVLLLGVIALLDNDEDSLEAVVEELHGLRTNHKVTASEQSSIGEVLRAIA
TLGEGRTEEDIRTQVQTDIMLYPNLPHGWAAMAQFTGDEHAALMALKVAARGIPPKGLLG
AQDLSKAYAGTATAGDAQRAAFLAPWEQSGWTSLSAATESI
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggacaaaagccgccctcaagggcatcaacgacgctattcgccagcaaaagttc
gatgatgctgtgagcaaagctcgggaccttctggaaaaggactccaagaactaccaagct
catatctttttggcatttgctctggacaaacaagacagactcgaccaagcccaggagact
tatcggtctgcaacatggcttcgaccccaagaagcacaagcttggcagggtctgatcaag
ctgtgtgagaagcaaaacaacaagaaactcacagactaccaccaagcagtagtcaatctg
gctcagatttaccgggacgccgatgacatgtacaaggctcaggatgtcgtggacaaattt
gtcgatttcgctagagtaaaaggagatgatattcaatacgccgaggcactgtcgatacaa
cttcctgaaagtccactctatcctgttcttgagggccgcttccctcatcccgctagaacg
tatgagactgtcgcgatcatcctcgagaagtacgagaagcaccggataaacaccctcatc
ggagagcggcgaaccaaactaggcgccaagctttctgaagtcactcttgatgccaaacgc
gaagtttacagtcagagcaagctcgaacacatttaccgacagctgatcaactggacaagc
gatgacgatttaagaagacagtacgaggagaagctcctgcagctttgctatgaccgcctt
ctggtcgcgccaacaggcgctgaaaaggacacagagcgccaaaaggttctcgagctggcc
aacggcatggttgccatcaaatatccttacaagctcgcctgggatatctctatagagtgg
caggacaagaaagaggtcagagaatgggatgtcgacgtccttcgtgcttattgctccttc
ttccctgacagcgacctgtacaaggtcatcacaagctatctgactagtcccatctcgcct
tttcccccagaaaaggcccaagagaaggccaaagcagcccccagtgacacagaggaaagc
tccgacgatgacgatggtggagttcccactcttgtggtacctttaaccgacgaggaccgt
cttatcatgatatccgaaggcattattaccgctgactcagttttcgcctatcgacttaca
ggccaatacctccttcatattggagagtatgaatcgaccgtcgaactcatgcgcaaggga
atggccctgttggcgcaggagcgtaagaagacaggtcttgcattcatcaatgccgaagac
tcctattacctctcactcggaacagccttggtgtactaccaatctcctcgacatcacaaa
gaagccaaggaactgttcgacaaggttcttgagcgtgatacaacttctacttctgctttg
attggcgttggcctcatttatgaggaggaggaggaatatgacgaagccattgactacctc
acccgagctttggaacgcgaccagactaacatgaaagtcaagtctgaagctgcctgggtc
aaggcgctcaagggagattggcaaaccgcaaaagacgaactgcaggaatgtattgaactc
ctggaaaaacaaggaactacatcaaaggagttactgggtgaaacacaacatcgccttgga
gtgtgtatctggaacatcgacaccagcaaggctgcgcgaaagcagcgaaagggagaatcc
gcgtatgcatactggttgagcgctctgagcaaccacctaaaccatgcacccacctacaca
tacctcggagcatactacgccgattacgccaaggataaaggtcgttcgaggcgttgcttc
cagaaagcactcgaactttctcacgctgaagtggttgcagcagagaggcttgctcgatcg
tttgcggatgacggagactgggatagagtcgagctcgttgcccgccgcgtcgtcgactcc
ggtaaagtgaagccgccacccggatctaagagaaagggaatcagttggcctttcgctgca
ctgggtgtggcagagctaaacaaacaagacttccacaaggctattgtgtccttccaagcc
gcgcttcgcatcagccccgaagactaccactcctgggttggtcttggagagagttaccac
agctctggccgacatgttgccgctaccaaggctattttgaacgcccaaaagcttgaggaa
gataccgaagctgacatctcaggagacacttggttcaccaagtacatgctcgctaacatc
aagcgtgagcttggcgagtacgacgagtccgtcgctctctacagatcagttattgagaca
catcccgaggaagagggtgtcataattgctttgcttcaaacaacagtcgacagtgcactt
tcttccgttgagaagggcttgttcggaaaggcaatacagcttgctactgagaccattgag
tatgcaaagacaactagtggcagcgttttcgagacctttaacttctggaaggccatcgct
gatgcgtgttctgtctattcatctgtccaaagccgcacaaaggacttcccttcggattcc
attcgaagtatcctcgagaagggctcacaggatgcttatgaaatcttcgccagcatcgac
aaagtcggcactgatgttgttttcgcccagggattatatgcagacgacgagcagcccggc
gtcgatctcacccggtgcatccatgccacgatcctttgccataagcagggagttcacatc
gcgtctaacgaccgccatgctcaatctgttgcctactacaatctgggatgggcagagtac
cgtgctcatatttgtctcccacctgaaattaggaagaagtctagcagctacatcaaggct
gcggtgcgatcgttcaagcgtgcgattgagttggaggccggaaactcagagttctggaat
gctcttggtgtggtaaccagcgagatcaacccatcggtctcgcagcatgcgttttcccga
agcttgtaccttaacgaacgaagccctgcggcctggacgaacctgggaacacttgcttta
ttgtcaggagatgtgaaattggccaacgagatctttacgagagctcagtcaactgatccc
gactatgcgcatgcttggctgggacaaggctttgtggccttgttgcatggcgaagctaag
gaagctcgtggactcttcactcacgcaatggagattgcagatgcatcttcagtgcctacc
agacgtcactacccaagctctttgttcgaccacatcctcacagtttctcccaacgatgtc
aatgttgagtctcttatccaaccactcttcgctctcaaccagcaccaaagcctcaagtca
caagatttggcctttgcgcatttggcaacactattccaagaacgcacaaatgagagtggt
cgtgctgttgagacgctggagaagatttcctcgaccattgaggctgactatgagagcacc
gaatctccccagagccttgccaagtttgctttggccaagaccgatttggcacgaacctac
cttgcatctggctcttatgataaggcggttgagtgcggtgagctagctctgggactgagc
agcgatgaggccgagaatgaactttcaagcgaccagcgcaagaaggcacgattatctgcc
catcttactgttggattggccgagtactaccgtaaccggtttgacgaagccattaaatat
ttcgagtccgcattggaggaatctgatggcaacccagatgccgtttgtttattggcccaa
gtactctgggcccaggggtccgaggcttctcgagacagagctcgcgaagagctattcgcg
gtgatcgaaaagcaacccgagcatgttcagtcggttcttcttctgggtgtgatcgccttg
ctagacaacgacgaggatagcttggaggcagttgttgaagagctacacggactccgcacg
aatcacaaggtcactgcatcagagcagtcaagcatcggcgaagtgttgcgagctattgca
actctgggagaggggcgcacagaagaggatataagaacacaggtacagacagatatcatg
ctgtaccccaacctgcctcatggctgggctgccatggcccaatttacaggcgatgaacat
gctgctctgatggcactcaaggtggcagcgagaggcattcctccaaagggtctcttgggt
gctcaggatctttcaaaggcgtatgcaggaacagcaacagctggcgacgctcaacgagcg
gcattcctggctccttgggagcaaagtggttggacatcgctttctgctgccactgagagt
atctga
DBGET
integrated database retrieval system
