Fusarium graminearum: FGSG_13120
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Entry
FGSG_13120 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_13120
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FGSG_13120
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
FGSG_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
PCB_OB
Motif
Other DBs
NCBI-GeneID:
23559927
NCBI-ProteinID:
XP_011327073
UniProt:
I1S8E2
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All DBs
Position
4:complement(3128551..3129750)
Genome browser
AA seq
208 aa
AA seq
DB search
MAVDDIPSVALPGKVLGPVTKFAPGAGTHAYEGNVVSSLLGQVTVTPAAKGPGPQKRLNK
ITAPTSEELATISVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQ
GLIRVQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAG
NDMVPISWKEYKDPETGISEPRKVAKPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgacgacatcccctccgttgccttgccaggcaaggttttgggtccggttacc
aagtttgcgcccggcgccggcacacacgcttacgaaggaaatgtcgtctcttctctactc
ggccaagttaccgtgacgcctgcggccaagggtccaggacctcaaaagcgccttaacaag
atcaccgcaccgacgtcagaagagctcgccaccatctccgtatcccgccatggtcgcaag
cgcgagattctccccgatgtcgataacatcgtacttgcgcgcgtgctccgtcttatgccc
aagcaggccattgtggtgatccagcaagtgggcgacactgttctccaaaccgagtggcag
ggcttgattcgagtgcaggatgtgagggcaacagagaaggacaaggtcaagatttacgaa
tccttcaagcctggtgatattgtacgagcgcaagtgatctctcttggtgaccaagccaac
tattacctctcaacagcatccaacgaactgggtgttatcctagccacgagcgaggcgggc
aatgacatggtccccatcagctggaaagaatacaaagaccccgaaacaggcatcagtgag
cctcgaaaagtcgcaaagcctagctga
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