Allofrancisella guangzhouensis: SD28_00385
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Entry
SD28_00385 CDS
T03527
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03030
DNA replication
fgu03410
Base excision repair
fgu03420
Nucleotide excision repair
fgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD28_00385
03410 Base excision repair
SD28_00385
03420 Nucleotide excision repair
SD28_00385
03440 Homologous recombination
SD28_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgu03032
]
SD28_00385
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_00385
Enzymes [BR:
fgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD28_00385
DNA replication proteins [BR:
fgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SD28_00385
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SD28_00385
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD28_00385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
NYN_YacP
OST48_N
FabMG
Motif
Other DBs
NCBI-ProteinID:
AJC48227
UniProt:
A0A0A8E3N1
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All DBs
Position
complement(72127..74805)
Genome browser
AA seq
892 aa
AA seq
DB search
MKKIVLVDGSSYLFRAFHALPKLTNSQGEPTGAILGVINMIKKLPVMYQTDYVAVVFDPK
GKSFRHEIYPEYKANRKAMDDELRVQIRPLHEIIKKMGFPLIIKENVEADDVIGTLAKEL
EAQGYQVVISTGDKDMAQLVSENVVLYDSMKDFTTDIPKVLEKYQVEPSQIIDYLALMGD
SSDNIPGVPMVGPKTAVKWLKKFKGIENIIENKDKIEGKVGENLRNNIDLLRLSYQLATI
KCDLKLNISIGDLKCKEMDKENLLKLFERYEFRSLLKALDIDVAAVEVKAVDIEYKTVLT
DKELESLLKTLENKDGFAFDTETDSLDTYEANLVGLSFCADKGQAYYIPLQHRYLGVPQQ
LELKTVLETLKPIFSDNQKFKVAHNFKFDEKVLSKYGIDIQGTIHDTMIMSYVLKSNGRH
DMDSVSKEYLDIEPIPYSAIAGTGKNQQTLDQVEIEKVAKYAAEDADITFRLYNCLKALL
YKEEILNKLYSEVEMPLTLILNQMEKNGVKIDADKLIKQSQELENSTKELEKKCFELCRQ
EFNLSSPVQLREVLFEKLGLPAIKKTVKGQASTSEEVLTQLAQEYEVADLIMKYRHLCKL
KNTYTDKLPAMLDKNLRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSSEGRKIREAFIAEE
GYYIVAADYSQIELRIMAHLSKDENLLKAFKHGLDIHSATAAEVLGISIDDVTSEQRRKA
KAVNFGLIYGMSAFGLAKQLKIPRNEAQEYIEVYFSRYPGIKEYMNTAKKVAQESGYVET
ILGRRLYLPEINSRNVMQRNAAERAAINAPMQGTAADIIKKAMIDVNAKLIKAQNKDVKM
IMQVHDELVFEVTKDKIDDICKEIKTIMEQAVTLSVPLEVNVDFGDNWDQAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagtcttggttgatggatcgtcgtacttatttagagcttttcacgcacta
ccaaagctcactaatagtcaaggtgaacctactggagctatcttgggtgtcatcaatatg
attaaaaaattaccagtaatgtatcaaacagactacgttgcagtggtgtttgaccccaaa
ggtaagagctttcgtcacgaaatctacccagaatataaggcaaatcgtaaggctatggat
gacgaactaagagttcaaattaggcctttacatgaaataattaaaaaaatgggttttccc
cttattatcaaagaaaacgttgaagcagatgatgtaataggtactttagcaaaagagctt
gaagctcagggttatcaggtagttatatccacaggtgataaagatatggctcagttagtg
agtgaaaatgtagtgttatatgactcaatgaaagattttacaacagatattccaaaagtt
ttagaaaagtatcaagtggaacctagccaaattatagattatttggctttaatgggagat
tcctctgataatattcctggggttccaatggttggtccaaagacagcagttaagtggctg
aaaaagtttaaaggtattgaaaatattatagaaaataaagataaaatagaaggcaaagtt
ggtgaaaacctgcgtaataatatagatcttcttaggttatcttaccaattagctactata
aagtgtgaccttaagctaaatatttctatcggtgatctaaaatgcaaagaaatggataaa
gaaaatttacttaaactttttgaaaggtatgagtttagatcacttttaaaggctttagat
atagatgtggcagctgttgaagtaaaagccgtagatattgagtataaaacagttcttaca
gataaagagttagaaagtttattgaaaactctagaaaataaagatggttttgcatttgat
acagaaacggattcattagatacttatgaggcaaatttggtagggttatccttttgtgct
gataaaggacaagcatattatatccccttacaacacagataccttggagtaccacaacaa
cttgagctaaaaactgtattagaaactttaaaaccaatattttctgataatcaaaagttt
aaagttgcgcataattttaagtttgatgaaaaagtcttatccaagtatggaattgatatc
caaggaaccattcatgatactatgattatgtcttatgtactaaaaagtaatggtaggcat
gatatggatagtgtttctaaagaatatctcgacatagagcctattccttacagtgcaata
gctgggactggtaaaaatcaacaaactttagaccaggtagagatcgaaaaggtagctaag
tatgctgctgaagatgctgatattactttcagattgtataattgtttaaaggctttatta
tacaaagaagaaattcttaataagctatattctgaagtagagatgccattaactttaatt
ctaaatcagatggaaaaaaatggtgtcaagatagatgctgataaattaattaaacaaagc
caagagctagaaaacagtaccaaggagttggaaaaaaaatgttttgagctatgtcgacaa
gaatttaatttatcttcgccggtgcaactaagagaagttttgtttgaaaaactaggatta
ccagctatcaaaaaaactgtaaaaggtcaagcttcaacctccgaagaggtacttacacaa
ctagctcaagagtatgaagtagctgatttaattatgaaataccgtcatctttgtaagcta
aaaaatacttatactgataaattaccagctatgcttgataaaaacttaagggttcacacc
tcatacaatcaaacaggtactgtaacaggtagattatcttcatctgatccaaatctacaa
aatatacctattaaaagttctgagggtagaaaaataagagaagcgtttatagcagaagag
ggttattatatagttgcagcagactactcacagatagaacttaggattatggcacattta
tccaaagacgaaaatcttctcaaagcatttaaacatggtttagatatacacagtgcaacg
gccgctgaggttttaggtataagtatagatgacgtaacaagtgagcaaagaagaaaagca
aaagctgtaaatttcggtttgatttacgggatgagtgcgtttggcttagcaaagcagcta
aaaatccctagaaatgaggcccaagagtatatagaagtatattttagtcgctatccagga
atcaaagaatatatgaatactgcaaaaaaagttgctcaagaaagtggctatgttgagact
atattgggaagaagattgtacttaccagaaataaattctaggaatgttatgcagcgtaat
gctgctgagagagcagctattaatgctccgatgcaaggtacagcagcagacattattaaa
aaagcaatgatagatgttaatgctaagcttataaaagcacaaaataaagatgtcaaaatg
ataatgcaggtccatgacgagctcgtatttgaagtgacaaaagataagatagatgatatt
tgtaaggaaataaaaactataatggagcaagctgttactcttagtgtaccacttgaggta
aacgttgattttggtgataactgggatcaagctcactag
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