Allofrancisella guangzhouensis: SD28_02200
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Entry
SD28_02200 CDS
T03527
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SD28_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_02200
Enzymes [BR:
fgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD28_02200
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD28_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
PriA_C
Helicase_C
ATPase_2
AAA_19
Mtr2
zf-CHY
AAA_30
DUF2039
Zn_ribbon_PriA
AAA_22
T2SSE
AAA_11
PIF1
Motif
Other DBs
NCBI-ProteinID:
AJC48544
UniProt:
A0A0A8E3M8
LinkDB
All DBs
Position
481451..483604
Genome browser
AA seq
717 aa
AA seq
DB search
MIVKVALAVPPTYLLDYRVDEQNVNLFDRVLVQVGKRQLIGFIVVKNVTVNYEITKIKPI
IKLLDKPISLQMQKIIQWVANYYCSDLYSAIRLALPNDYFKHEVITPSQEVSVYIDQIKL
QDHKPTLKQQQLLANFKEKELISLEELKTLGSVHVINGLFKKGILIKKIQLKNLFTNASE
NDCPKKLAVEQQKAVETILNTNAFKVFLLYGVTGSGKTEVYLQTISKYLEKLKQVLVLIP
EINLTPQTVKRFKQRFNNKKTVVLHSKLSEKARLTNWLNIKEGNADIIISTRSGVLADFK
DLGVIIVDEEHDNSFKQQTSTIRYNARDLAIFRAKELNISIILGSATPSIESYYNALAGK
YKLLQLKNRALNNYLNEIRLLDLKSSIVDNGISNTLFSLLEKNINSHQQSLIFINKLGFA
KALVCKVCGDAIECKKCDKPYTLHTQPYQYLECHFCSTRKPLVVVCSSCGGELFTYGVGT
EKIQSRLEARFPYNKIIRFDRNNIKTINDLNGINKMINSNMVDIVVGTQMIAKGHDFENI
TLVGLVNIDAGLYSADFHAIEKTAQTIIQVSGRAGRADKQGLVLLQTYQPENRLLQLLVS
KGYLEFLDYLLEQRKYANYPPYTYQAQVIAESKKETDILEYLNTLYGQLSFVGDITISKP
LPALHLKKNNIYRYSLLMTSQSRKHINTIIRWIKNTTETQPPKSIKLYFDIDPIELG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgaaagttgctttagcagttccaccaacctatttattagactacagggtcgat
gagcaaaacgtaaatttatttgatagggttttggtacaagttggtaagcgccaacttata
ggttttattgtggttaaaaatgtcacagttaactatgaaattacgaaaataaaaccaata
attaaactgcttgataaacctataagtttacaaatgcaaaaaattattcaatgggtggct
aattactattgctctgatctttatagtgcaatacgtctggcattgccaaatgactacttt
aaacatgaggttattacaccgagccaagaggtttctgtttatattgatcaaattaagttg
caagaccataaacctacacttaaacagcagcagctattagcaaattttaaagaaaaagaa
ttaattagccttgaagagttgaaaactttaggatctgttcatgttattaatgggcttttt
aaaaaagggattttgataaaaaagattcagttaaaaaatttatttacaaatgctagtgaa
aatgattgccctaagaagttagcggtagagcagcaaaaagctgtagaaactattttaaac
acaaatgcattcaaagtttttttactatatggtgtaacaggtagtggtaagacagaagtt
tatttacagactatcagtaaatatctagagaaattaaagcaagttttagttttgattcca
gagataaaccttacaccacaaaccgtgaaaaggtttaaacaacgttttaataataaaaaa
actgttgtgttgcactctaaattaagtgaaaaagcacgtttgactaattggcttaacata
aaagagggtaatgctgatattataatctcaacaagaagtggtgttttagcagattttaaa
gacttaggtgtaatcattgttgatgaagagcatgataattcatttaaacaacaaactagc
accatacgctataatgcacgtgatctagctatattcagagcaaaagagctcaatatatct
attatattaggtagtgctacgccttctattgagagctactataatgctctagcaggaaaa
tataagcttttacagcttaaaaatagagctcttaataactacttaaatgaaataaggctt
ttggatttaaaatcaagcattgtagataacggtataagcaatactcttttttctctttta
gaaaaaaatattaattctcatcaacagtcattaatttttataaataagcttggctttgca
aaagctttagtgtgcaaggtttgtggtgatgctattgaatgtaaaaaatgtgataaacct
tatacattacatactcaaccatatcagtatttagaatgtcatttttgtagtacacgtaag
ccactagttgttgtatgttcttcttgtggaggagagttgtttacttatggtgttggaact
gaaaaaatacagtctaggctagaagctagatttccttataataaaattatccgctttgat
agaaataatatcaagactataaatgatcttaacggtataaataaaatgattaattcaaat
atggttgatattgtagtaggtacgcaaatgatagctaaaggtcatgattttgaaaatata
actttagtagggttggtaaatatagatgctggtttgtatagtgcagattttcatgctata
gaaaaaacagctcaaacgattattcaagtatcaggaagggcaggaagagcagataagcaa
ggattggtgttactacaaacttaccagccagaaaatagacttttgcaactattagtgagt
aaaggttatttggagtttttggattacttgttagagcaaagaaaatacgctaattatcca
ccgtatacttaccaagctcaagtaattgcagaatccaaaaaggaaacagatattttagag
tatttaaacactttatatggtcaattatcttttgttggcgatattacaatatcaaaacct
ctaccagcgctgcacttaaaaaagaataatatttacaggtatagtttgttgatgacatca
cagtcccgtaaacatataaatactataatcagatggataaaaaatactacagaaactcaa
ccaccgaaatcgataaaattatattttgatattgacccaatagagttagggtga
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