Allofrancisella guangzhouensis: SD28_05255
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Entry
SD28_05255 CDS
T03527
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SD28_05255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_05255
Enzymes [BR:
fgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SD28_05255
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SD28_05255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AJC49083
UniProt:
A0A0A8E539
LinkDB
All DBs
Position
complement(1116275..1117063)
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AA seq
262 aa
AA seq
DB search
MKITSFNANGIRAATKKGFWGWFKTQNVDFLCIQETKAQFHQLESDPTYFPEGYFYDYKD
ATKKGYSGVAIYAKKKPIRVIKEIGIDWADDEGRYIQFDYENFSIASLYLPSGSSGDVRQ
GYKMQFLEKYTEVLKQQIQSGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQAWL
DHIFYDLGWVDTFRVINQEPLQYTWWSNRGQARAKNVGWRIDYHISTPALKDKVIPKSEH
IYKENWFSDHAPISICYDYEIL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacaagctttaatgctaatggaattcgggcagcaactaaaaaaggtttttgg
ggttggtttaaaactcaaaatgtagatttcttatgtatccaagaaacaaaggcccaattt
catcagttagaatccgatcctacatactttcctgaaggatatttttacgactataaagac
gctacaaaaaaaggttatagtggtgtagccatttacgctaaaaaaaagccgatacgagta
atcaaagaaattggtatagattgggcagatgatgaaggaagatatatccaatttgattat
gaaaattttagtattgcaagcttatatctaccatctggctctagtggtgatgtccgtcaa
ggatataaaatgcaatttttagaaaaatacacagaagtattaaaacagcagatacaatct
ggaagagattttatagtttgtggtgactttaacatagtgcataaagagatagatataaaa
aattggaaatctaactatggtaaaacttcaggggtattacctgaagaacaagcatggtta
gatcatatattttacgatttgggctgggtagatacttttagagtgattaaccaagagcct
ctacagtatacttggtggtcgaaccgtgggcaagctagagcaaaaaatgttggctggagg
attgattatcatatctcaacacctgctctaaaagataaagtaatacctaaatcagagcat
atctataaagaaaattggttttctgatcatgctccaattagtatttgttatgactatgag
attttatag
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