Allofrancisella guangzhouensis: SD28_06420
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Entry
SD28_06420 CDS
T03527
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03030
DNA replication
fgu03430
Mismatch repair
fgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD28_06420
03430 Mismatch repair
SD28_06420
03440 Homologous recombination
SD28_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgu03032
]
SD28_06420
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_06420
Enzymes [BR:
fgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD28_06420
DNA replication proteins [BR:
fgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SD28_06420
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SD28_06420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF2335
Motif
Other DBs
NCBI-ProteinID:
AJC49287
UniProt:
A0A0A8E6Q9
LinkDB
All DBs
Position
complement(1366817..1370299)
Genome browser
AA seq
1160 aa
AA seq
DB search
MFTMISHLRVHTGFSIIDSTVRLNELFEVAKQKNIVALALTDVCNLFAAVKFYKQALKTG
VKPIFGVELKIDTDIGICDLVLLAENNQGYQNIVNLISKAYQEADRAGSIPLVPKDWLKQ
MDLKYTICLNGGQNGELGKAILSKDFNKISEVAAEYVSLFGKDNYFIEIHKLGYENESLY
NQKALELANEKHLFAIATNLTVFMDSQDYDIHEIRACINEKTTILDETRKSRFTQEQYLK
SSSEMYEVFGDLPVLLTNTLVIAKRCNVTFELGKPSLPTVGIPEGLTEKRYFTKICYQGL
EKRLEKILSLKSADKHEQIIKIYKERLQREIDIICDMGFPGYFLIVEDFIRWAKENDIPV
GPGRGSGAGSLVAYSLSITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYV
EQKYGKESVAQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHKG
EPLYEEMKFDDDIAEIVEKAQKLEGLPRSLGKHAAGIVISPTMISDFAPIYCEDKGGDIV
TQFDKGDVEDVGLVKFDFLGLKNLTIINNTVKSINAKKKDNELLINISDIPLDDKQTYKL
LQAGNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKRI
SYLHPLLEEVLKETYGIPVYQEQVMQMAQKLAGYTLGAADLLRKAMGKKKPEEMEQQRKI
FKEGAKKYNNIDSGLADEIFGQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAA
LMSGDMANTDQLVKFILDCKNIDISVQAPNVNTSVYDCIAISKGTILLGLGAIKGLGGEA
IKSILTERQLAGNFSSIFDLCRRVDLRKVNKKALEALCFAGAINGISKNRATAFNSVEKA
IKNAGYVNDMNAAGQDDLFGFTEQESDTDSEFEKECFTEEWSLRELLINEKKALGMYFSG
HILDEESHWRNHVSFSDLEKIQRSNMDGNSVRIIASMITPAIRRKTKTGRVLYIINIDDE
FDRVDCLVSEAIFASVKDSINVDDIVVVEGKVSRDIQRERNKLSVDKVQPISQYIDENFN
KVKLTLKCENVNPTNLIKVLNNFKNNISSHNDQKSNILEIAVSLDGVEASFDTLQKPFSI
YEFVNDISKLIPEGSIVSLG
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaatgatttctcatcttagagttcatacgggattctctattattgatagtaca
gttaggctaaatgagctttttgaagtggccaaacaaaaaaatatagttgctttagctttg
actgatgtatgtaatttattcgctgcagttaagttttacaaacaagccttaaaaacaggg
gttaaaccaatatttggtgttgagctaaaaattgatacagatattgggatatgtgattta
gtgctactagctgaaaataaccaagggtatcaaaatatagttaatcttatttcaaaagca
tatcaagaggctgatagggctggctcgatccctctggtgcctaaagactggctcaagcag
atggatttaaagtacactatttgtctaaatggcggtcaaaatggtgagttaggtaaagct
atactttcaaaagattttaataaaatttcagaagttgcagcagagtatgttagtcttttt
ggtaaagataattattttatagaaattcataaattaggctatgaaaatgagagcttatat
aatcaaaaagctttggagttagctaatgaaaagcatttgtttgctatagctactaaccta
acagtatttatggattcgcaagattatgatattcatgaaattagagcttgtattaatgaa
aaaacaactatcttggatgagactagaaaatctaggtttacacaagagcagtatttaaaa
tcatcaagtgaaatgtatgaagtttttggtgatttaccagtattactaaccaatacttta
gttatagcaaagcgttgtaatgttacatttgagcttggtaagccgtcattacctactgtt
ggtatccccgagggtttaacagagaagcgatactttacgaaaatatgctatcaaggatta
gaaaaacgtctagaaaaaatattatcacttaagtcagcagataagcatgaacagataatt
aaaatttataaagaaagactacaaagagaaattgatatcatctgtgatatgggttttcca
ggatattttcttatagttgaagattttatacgttgggcaaaagaaaatgatattcctgta
ggtcctggtcgtggttcgggagctggatctttggtagcttattccttatcaattacagac
atagatcctttaccttatgggttactttttgaaaggttcttaaatccggaaagagtctca
atgcctgactttgatattgacttttgtatccaaggtagagatagagtaatcaaatatgtt
gaacaaaagtatggtaaggaaagtgtagcccaaattattacgtatgggacaatggctgct
aaaggtgttgtgcgtgatgtagtaagagttatgggacaaagctttggttttggtgatagg
atagctaaacttattccagagacacctggcacgacttttaaaaaaatccttcataaaggc
gagcctttatacgaggaaatgaaatttgatgatgatattgcagaaatagttgaaaaagcc
caaaaactagaaggtttaccacgtagtttaggtaagcatgcggctggtattgttatatca
ccaacaatgatttcagattttgcacctatatactgcgaggacaaaggtggagatattgtt
actcagtttgacaaaggcgatgtagaagatgttggtttagttaaatttgattttttaggt
ttaaaaaacttaacgataataaataatactgttaaaagtattaatgctaagaaaaaagat
aatgaacttttaataaatatctctgatattcctttagatgataaacaaacctataaactt
ttgcaagctggcaatactacaggaatattccagcttgaatcacagggaatgcgtcagata
gttaaagatcttggtacttcaaattttgaggaaattattgcactagttgcattgtatcga
ccagggcctatggagaatatcccaacatttatagaccgaaaacatggacgtaagcggatt
tcttatttacatcctttacttgaggaggtccttaaggaaacttacggtataccagtttac
caagagcaagtaatgcaaatggcccagaaattagctggctatactcttggggctgcagac
cttttacgtaaagcaatgggtaaaaagaaaccagaggaaatggagcaacaacgtaaaatt
tttaaagaaggagctaaaaaatataataatattgattctggtttagctgatgaaatattt
ggtcaaatggaggcttttgctggttatggttttaataaatctcatgctgctgcatatgct
ttaatagcttaccaaacagcttggttaaaagctcactaccctgatgagtatatggctgcc
cttatgtctggtgatatggctaatactgatcagttggtgaagttcattctagactgtaaa
aacatcgatatatccgtccaagcacctaatgtaaacactagtgtatatgattgtattgct
atttcaaaaggtacaatattacttggtttgggtgctataaaaggtcttggtggtgaggct
atcaaaagtattcttacagagaggcagttagcaggtaactttagttcaatttttgattta
tgtcgtagagtagacttgcgtaaagttaataaaaaagctcttgaagcattatgctttgct
ggtgctataaatggtatttcaaaaaacagagctacagcttttaattctgttgaaaaagct
ataaaaaatgctgggtatgtaaatgatatgaatgctgctggccaagatgacttatttggc
tttacagaacaagagagtgacacagattctgaatttgaaaaagaatgtttcacagaagaa
tggagcttgagagagttactaataaatgaaaaaaaagctttgggtatgtattttagtggg
catattcttgatgaagaaagccattggcgtaatcatgtaagctttagtgatcttgaaaaa
attcagcgctccaacatggatggaaattcagttaggatcatcgcaagtatgataactcca
gctattagaagaaagactaaaactggtagggttttgtatattattaatattgatgatgag
tttgacagggtagattgtttagttagcgaagctatatttgcatctgtcaaagatagtata
aatgttgatgatatcgttgtagtagaaggtaaagttagccgagatatacaacgagagaga
aataaattaagcgttgataaagtccaaccaatttctcaatacatcgacgaaaattttaac
aaagtgaagttgacattaaaatgtgaaaatgtaaaccctactaatttaataaaagtcctt
aataactttaaaaacaatattagttctcataatgatcaaaaatcaaatattttagagata
gctgtatctttagatggagtagaagctagttttgatactttacagaagcctttctcaata
tatgagtttgttaatgatattagtaaattaattccagaaggtagtatagttagtttgggg
tag
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