Allofrancisella guangzhouensis: SD28_07460
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Entry
SD28_07460 CDS
T03527
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SD28_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgu03021
]
SD28_07460
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_07460
Enzymes [BR:
fgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SD28_07460
Transcription machinery [BR:
fgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SD28_07460
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SD28_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AJC49463
UniProt:
A0A0A8E624
LinkDB
All DBs
Position
complement(1603845..1604801)
Genome browser
AA seq
318 aa
AA seq
DB search
MTIENLLHPTNIKINDYGKNATKFSFEALDRGAGYTLGFALKQTMLYSIGGACITSIKIN
DGKVNSLEDTIPCEETVADIILNIKALAVTLADNTDSGTITFDLSGAAEEIFSGEAKLSQ
GLSINEDVFICSYMGSKKFKIEAKVEKGVGYRSAVESFKDGEFLLDAAFSPVTFCEFEVK
NARVGRRTDLDRLDFNIKTNGNIVSQDALRLAAAKIQSQLVNIVNVDEINQGVFVEDPTK
NIDPILLKHVEELNLTARSSNCLKAVNIKYVGELVQKTETELLKAPNFGKKSLNEIKDKL
VELDLSLGTIINNWPEDL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactatagaaaatttactacaccctactaatattaagataaatgattatggtaaaaat
gctactaaattctcttttgaagcgttagatagaggtgctggatatactcttggttttgct
ttaaagcaaactatgctttactctattggtggagcatgtattactagtatcaaaattaat
gatggcaaagttaactctttggaagatacgattccgtgtgaagaaacagttgctgatatc
attctgaatattaaagctcttgctgtaacattagcagataatactgatagtgggactatt
acttttgatttatcaggagccgctgaagagattttctctggagaggctaagctatcgcaa
ggtttatctataaatgaagatgtgtttatttgtagttacatgggtagcaaaaagtttaaa
atagaggctaaagttgaaaaaggagttggctataggtcagcagtagaaagttttaaagat
ggtgagtttttgctagatgctgctttttcaccagttactttttgtgaatttgaagttaaa
aatgctcgtgttggtagacgtacagaccttgataggttagactttaatatcaaaactaat
ggtaatatagtatcccaagatgctctaagattagcagccgctaagattcaaagccaatta
gttaatattgttaacgttgatgaaataaatcaaggagtttttgtagaagatcctactaaa
aatattgatccgatactattaaaacacgttgaagaattaaatctaactgcaagatcatca
aactgtttaaaagcagtaaatatcaaatatgtaggtgagcttgtacaaaaaacagaaaca
gagttattaaaagcaccaaattttggtaaaaaatctttaaatgaaattaaagataagctg
gtagagttagacctgtctttaggtactattataaataattggcctgaagatttataa
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