Fervidobacterium gondwanense: QO060_01380
Help
Entry
QO060_01380 CDS
T11133
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fgw Fervidobacterium gondwanense
Pathway
fgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QO060_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgw03019
]
QO060_01380
03016 Transfer RNA biogenesis [BR:
fgw03016
]
QO060_01380
Enzymes [BR:
fgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QO060_01380
Messenger RNA biogenesis [BR:
fgw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QO060_01380
Transfer RNA biogenesis [BR:
fgw03016
]
Prokaryotic type
tRNA degradation factors
QO060_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
XEY04670
LinkDB
All DBs
Position
308135..310219
Genome browser
AA seq
694 aa
AA seq
DB search
MSVKEWKKVLFGKEWTFQHGKVAKQSAGSIWARFGDSVVLATVNVSDNIVEGIDFVPLTV
EFMEKFYAAGKIPGGFVKREGKPSESGILSSRLIDRPIRPLFPKRLRNEVQVIVTVLSVD
PDCPADVLGISAASLTLNISKIPFDGIAAGVQVGYVDGEFIVFPTVEQLERSKIDIVVAG
TKDAITMVEGEAKEVSEDEMLKALMVAHEAIKEIVAFQEEILKEFQIEKMPLPEPKYNVE
LVEKFAEYVDMNELEKRIFIRGKQERAEMADDYYESIVQKFFGDNNICEEEQEEYKIPLK
EKYDELSKKLMRKIIIERGMRADGRGPKDIRPITCEVGLLPRTHGSSLFTRGETQSLGIV
TLGSPAEEQIIDTLVEEGTKRFILHYNFPPFSTGEVKPLRGTSRREIGHGHLAERAVKAI
IPSEDEFPYVIRVVSEILESNGSSSMATVCSASLALMDAGVPVKKHVAGVAMGLVLEGDK
SVVLTDILGLEDHWGDMDFKVAGTNDGITAFQMDCKVSGVSEELLRTALYQAKEARMFIL
GKLYETISEPRKELSPYAPRISWFYIDPSRSGELIGPGGRIIKSIIKMFDVEIALDDESG
KVTVSGVNAEKVNEAVEYIKNMFRDVNVGDVYDGKVTRVENYGIFVEIAPGKTGLTHASK
LGNMKPNAFKVGDRIKVEVVSIDETGRFQLRRVE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaagaatggaaaaaggtgctttttggtaaggaatggacattccaacacggt
aaagttgctaagcagtccgctggttctatttgggcgaggtttggtgacagtgttgttttg
gcaaccgtgaatgtttctgacaatattgttgagggtatcgactttgttcctttaaccgtt
gagtttatggagaagttctatgcagcaggtaagatacctggaggttttgttaaaagagaa
gggaagccttcagaaagcggaatcctttcttcaaggcttatagatagacctattaggcca
ctctttccaaagagactaagaaacgaagtccaagttattgtaactgttctatcggttgat
cctgattgtccagcagatgtacttggaatatctgccgcgtctcttacattaaatatttca
aaaataccatttgacggtattgccgccggtgtccaagttggttatgtcgatggtgagttc
atagtctttccgacagtcgaacaacttgaaagaagtaagatagatatcgtcgttgctgga
actaaagacgctatcacaatggttgaaggtgaagcaaaagaggtaagcgaggacgagatg
ctcaaagcactaatggttgcgcatgaagcaatcaaggaaattgtcgcgttccaagaggaa
attttgaaagagttccagattgagaaaatgcctcttccagagcccaaatacaacgttgag
ctcgttgaaaaattcgcagaatatgtagatatgaacgagcttgaaaagaggatatttatc
cgtggaaaacaggaacgagctgagatggctgatgactactatgaaagtatagttcaaaaa
ttctttggggataacaatatatgcgaagaagagcaggaagaatataagataccattgaaa
gaaaagtatgatgaattatccaagaaactcatgagaaagataattattgaacgtggaatg
agggcagacgggagaggaccaaaagacattagaccaattacatgtgaagtcggcctttta
ccaagaacccacggttcttcacttttcacacgaggtgaaacacagagtctcggtatagta
acgctcggttctcctgcagaagaacagatcatcgacacactcgttgaagaagggacgaaa
aggttcatacttcactataacttcccgccattctcgacaggtgaagtaaaaccgcttaga
ggcacgagcagaagagaaattggacatggtcatcttgctgaacgggcggtaaaagctatt
ataccgtcagaagatgaattcccatacgttataagggttgtatctgagatacttgaatct
aacggttcatcgtcgatggcaactgtatgttccgcttcattagcactaatggatgcagga
gttcccgtgaagaaacatgttgcaggagttgcgatggggttggtacttgaaggtgataag
tcagttgtgcttacagatattctcgggcttgaagaccactggggagatatggattttaaa
gtcgcgggaacaaacgatggtataacagcatttcaaatggactgtaaagtctctggggtt
agcgaagagcttctcagaacggcactttaccaagcaaaagaagcaaggatgttcatcctt
ggtaaactctacgaaacaatatctgaaccaaggaaggagttatcaccatatgccccaaga
attagttggttctatattgacccttcaaggtctggagaattgatcggaccgggtggtagg
attataaaatcgataattaagatgtttgatgtagagatagctcttgatgacgagagtgga
aaagtaacagttagtggtgttaacgcagagaaagtcaatgaggccgtcgaatacattaaa
aacatgtttagagatgtgaatgttggtgatgtatacgatggaaaagtaacgcgcgttgaa
aactacggtatattcgtggaaatcgcaccgggtaaaacaggtttgactcatgcgagcaag
cttggtaatatgaaaccgaacgcgttcaaagttggcgacagaatcaaggtagaagttgta
agcatagatgagactggtcgttttcaactaaggagggttgaatga
DBGET
integrated database retrieval system
