KEGG   Fervidobacterium gondwanense: QO060_04340
Entry
QO060_04340       CDS       T11133                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fgw  Fervidobacterium gondwanense
Pathway
fgw03030  DNA replication
fgw03430  Mismatch repair
fgw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fgw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QO060_04340
   03430 Mismatch repair
    QO060_04340
   03440 Homologous recombination
    QO060_04340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fgw03032]
    QO060_04340
   03400 DNA repair and recombination proteins [BR:fgw03400]
    QO060_04340
Enzymes [BR:fgw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QO060_04340
DNA replication proteins [BR:fgw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     QO060_04340
DNA repair and recombination proteins [BR:fgw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     QO060_04340
SSDB
Motif
Pfam: RNase_T DEDDh_C DNA_pol_A_exo1 RNase_H_2 Rv2179c-like WW_1
Other DBs
NCBI-ProteinID: XEY05207
LinkDB
Position
complement(908839..909408)
AA seq 189 aa
MIWDENVYCAVDIETTGIDPSAGDRIIEIAIIPVYKGKIVKEWIYSSLVNPKVGIQTYAQ
GVHKISIKDIEQAPGLDEILSIVRKYSKDTIFVFHNARFDLTFLDYAAKEVGQLPLDIFY
IDTLEISQNVYGKRRKLESLAVEMKINHKVTHRAFDDAYVTANVFIKFFEKFGWEIIHEF
LRRWAGREY
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgatctgggatgaaaatgtgtactgcgctgttgacatagagacaacaggcatagaccct
tctgctggagatcgaattatcgaaattgcaatcataccagtttacaaaggcaagattgtc
aaagaatggatttactcatcgctcgtgaacccaaaagttggaatacaaacgtatgctcag
ggtgttcataaaatctcgataaaggatatagagcaagctccaggattggatgaaatcctc
tcaatcgttaggaagtattcgaaagacacgatttttgtttttcataatgcaaggtttgac
ctgacattccttgactacgctgcaaaagaagtcggacagctaccattagatattttttac
atagatactctcgagatatctcaaaatgtttacggaaaacgcagaaaactggagagctta
gccgtcgagatgaaaattaatcataaggttacacacagagcatttgacgatgcttatgtt
actgctaatgtttttattaagttttttgaaaaatttggctgggagattatacacgaattc
ttgagaaggtgggcggggagggagtattaa

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