Francisella halioticida: CDV26_01070
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Entry
CDV26_01070 CDS
T04972
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fha
Francisella halioticida
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fha03016
]
CDV26_01070
Enzymes [BR:
fha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CDV26_01070
Transfer RNA biogenesis [BR:
fha03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDV26_01070
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ASG67160
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Position
192546..194402
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AA seq
618 aa
AA seq
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MQKNSLVIFKSKPAKVIDVLDKKIEIETLDGKNIKLPPKNVQLLVQADRDFELDSLEELV
IAELEMTWELLQEQENTTIEELSELLFERIGVNEAYTIWLLVFQGEYFSFDESFNIVIHS
VEKRDGITNERQEKQKKEQELNDFVERVKQKSYAPQDEKFLKEIAALATLKSPHCRLFKY
LNMEESENSAYKLLLDIGYWDEFYNPYLYRYDAELENNPAKFEYNVDSDSDRVDLTHLIA
YAIDDEGSNDPDDAISWDFDRNKIWVHIADASSSISFGDDVDLEARARGSNLYVPENIVS
MLPEKTTQELGLGLKAISPALSVGFKVNEQGDIQDIEICFSKIKVTRHSYEFAENSIEEL
ELGDIITYAKYFTQKRVSQKAVELDFPEIKVILDDNRNVKLTGLPRLKSRTLIRDTMLMA
GVAVGQFCIKNNIVVPFSTQPEHDLEQDYLENLDSIADMFATRKKLQRGKYSTTPAKHAG
MGLDTYVQVTSPLRRYLDLLVHYQLRRFLSQKILLQTDDVDNMIAQVDIPIKTNRQTERF
SNSHWKLVYLMQNPNLEFEATVIEKLERGRLMVSIADLAMTKKLSVNAKYELNDNLKLQN
TSVNLVTQEAFFKVIEEN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaattctttagtcatttttaaatcaaaacccgctaaggttattgatgtttta
gataaaaaaatagaaattgaaaccttagatggtaagaatataaagttaccacctaaaaac
gttcaattgcttgtacaggctgatagagattttgagcttgatagcttggaagagttggta
attgctgagttagaaatgacttgggaactattgcaagagcaagaaaatacaactatagaa
gaattaagcgaacttttatttgaacgtattggtgtaaatgaagcctatactatttggttg
ctagtgtttcaaggtgaatattttagttttgatgagagctttaatatagttattcattct
gttgaaaagcgtgatggaattactaatgaaagacaggaaaagcagaaaaaggaacaagaa
cttaatgattttgtagagagagtaaagcaaaaaagctatgctccacaagatgagaagttt
ttgaaagaaattgcagcgcttgcgacattaaaaagcccacattgtcgtttatttaaatat
cttaatatggaagagtctgagaatagtgcttataagcttctattagacataggctattgg
gatgaattctataatccatatttatatagatatgatgcagaattagaaaacaatcctgca
aagtttgaatataatgttgattcagatagcgatagagttgatttaacacatttaatagct
tatgcaattgatgatgaaggaagtaatgatcctgacgatgctattagctgggactttgat
agaaataagatatgggtacatatagctgacgcttcatcaagcataagttttggtgatgat
gtagacttggaagctcgagcaagaggttcaaacctttatgttccagaaaatatagtttcg
atgttacctgaaaaaacaacccaagagctagggctaggattaaaagctatttctcctgct
ttatctgtaggttttaaagttaatgagcaaggtgatattcaagatattgagatatgtttt
agtaaaataaaggtaactagacattcatatgaatttgcggagaatagtattgaagagtta
gagcttggggatattattacttatgcaaagtacttcacacagaagcgtgtgtctcaaaaa
gctgtagaacttgattttcctgagataaaagtaattctagatgataatagaaatgtaaaa
ctaacaggtttaccaaggttaaagtcacgcactcttataagagacactatgcttatggct
ggtgttgcggtaggtcagttttgcataaaaaacaatattgtagtgcctttttcaacacag
cctgaacatgaccttgagcaagattatttagaaaatcttgattcaatcgcagatatgttt
gctacgcgtaagaaactacaaaggggtaaatattcaactactcctgcaaaacatgctgga
atgggattagatacttatgtacaggtaacaagtccattaagaagatatcttgatttactt
gttcactatcaacttagacgctttttaagtcaaaagatattattacaaacagatgatgtt
gataatatgattgctcaagttgacattcctattaaaacgaatagacaaactgaacgtttt
tctaattctcattggaaattagtttatttgatgcagaatccaaatttagaatttgaagca
acagttatagagaaactagaaagaggtagattgatggtttctatagctgatttggcgatg
acgaaaaaactttctgtaaatgctaagtatgagttaaatgataatttgaaattgcaaaac
acctctgtaaaccttgtaacacaagaagctttctttaaagttatagaagaaaattaa
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