Francisella halioticida: CDV26_01195
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Entry
CDV26_01195 CDS
T04972
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fha
Francisella halioticida
Pathway
fha03420
Nucleotide excision repair
fha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDV26_01195 (uvrD)
03430 Mismatch repair
CDV26_01195 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fha03400
]
CDV26_01195 (uvrD)
Enzymes [BR:
fha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDV26_01195 (uvrD)
DNA repair and recombination proteins [BR:
fha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDV26_01195 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CDV26_01195 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF4252
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ASG67184
LinkDB
All DBs
Position
215473..217698
Genome browser
AA seq
741 aa
AA seq
DB search
MSNKFLSGLNSQQQRATLLEDRNSLILAGAGSGKTKVLTSRIAYLCQNKGVAIDNILAVT
FTNKAAREIQQRVEGMLGISTFGMWIGTFHGIAHRLLRKHAHELSLDKNFRILDQDEQAQ
LIKKVIKGLELDDKKYPPKLLQNFINKQKDKAMRSNKLANQYDANYSHIYKAYEERLLLD
NALDFADLLLYLYELFSLNQQLREYYQNLFKYILIDEFQDTNQVQYLWLKLLATNNNYTM
AVGDDDQSIYGWRGAVVDNIHNYVKDMNNVEVIKLEQNYRSTKNILKAANSVIKNNDNRM
SKELWSAAEEGDKVEVYCAVNERDEAKYIIQKIKGLHSDGVDYSDIAILYRSNYLSRILE
ESCIYASIPYRIYGGFKFFDRAEIKDALAYLRLAVTNNDNLAFERIINTPARGIGNKTLE
IIRNFAQINSISYWQATIDVTQREFVTKRTAGLLLKFVELINDISGKISELSLDKLLEHV
INKSGLLASYEEKNTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLEA
GDMQADETVDSIQLMTIHASKGLEFKYVFMVAAEEGVFPPSSIINAEEDFDSKYSNKMQE
KLAEERRLFYVAITRAMKVLTISYAQVRNIFGRSSFQVKSRFLSEIDDEHLNEGKNHSIN
MLKTKIKQKSNFGVSAFDFLKSNSSTRDSFNPGDRVYHKVFGKGLFIKAQSQGTKKFYTI
NFGDDVGQKILLADIANLVKI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaatttttatcaggattgaattctcaacaacaaagagcaactttgttagaa
gatcgcaattctttaatactagcaggagcagggagtggtaaaacaaaagtcttaacttca
cgcattgcatatctatgtcaaaataaaggtgtagcgatagataacatattagctgtaaca
tttaccaataaggccgctagggagattcagcaacgtgtagaaggtatgctgggaatatct
acttttggtatgtggataggtacttttcatggtattgcacatagattattacgtaagcat
gctcatgagttgagtttagataagaactttagaatacttgatcaagatgaacaagctcag
cttataaaaaaagttataaagggtttggagctagatgataaaaaatatcctcctaaatta
ttgcaaaatttcataaataagcaaaaagataaggctatgcgtagtaataaacttgctaat
caatatgatgcaaattatagtcatatttataaggcttatgaagagcgattgttattagat
aatgctttggattttgcagatcttcttttatatttgtatgaacttttttctttaaatcaa
cagctgagagaatattatcaaaacttatttaaatatattcttattgatgagtttcaggat
accaatcaagttcagtatctatggctaaagcttttagctacaaataataattatactatg
gctgttggtgatgatgatcagtctatatatggttggcgaggagcggtcgttgataatatt
cataactatgttaaagatatgaataatgttgaagttataaagttagagcagaactatcgc
tcaactaaaaatatcctaaaagctgcaaactcagtgattaaaaataatgataatagaatg
tcaaaagagctttggtcagcagctgaagaaggcgataaagttgaagtttattgtgctgta
aatgagcgagatgaagctaaatatataatacagaagataaagggattacatagtgatggt
gttgactacagtgatatagctattttgtatcgctcaaattatttatcgcgtattttagag
gaaagttgtatatatgcaagtattccttacagaatttatggcggttttaaattctttgat
agagctgaaattaaagatgcactagcttatttgagattagctgtaacaaacaatgataac
ttagcatttgagagaattataaatactccggctagaggtattggtaataaaaccttagaa
attattagaaattttgcccaaataaattctatatcgtattggcaagcaacaattgatgtt
actcaaagagagttcgttactaaaagaacagctggactgcttttaaaatttgtagaatta
attaatgatatctctgggaaaattagtgaattaagtttggataaattactcgagcatgtt
attaataagagtggcttacttgcttcttatgaagagaaaaatacagaaaaagatcgtcaa
aaaatagataatttaaaagagcttataagtgctgcaaaagattttgaacctcaaatagaa
ttactggatgataatacagatattttacaagactttttatcatttgccgtattagaagct
ggtgatatgcaagctgatgaaactgttgatagtattcaattaatgactattcatgcatca
aaaggcttggagtttaaatatgtgtttatggttgcagctgaagaaggagtttttccaccg
agttcaattattaatgcagaagaagattttgatagtaagtattccaataaaatgcaggaa
aagttggctgaagaaagaagattattttatgttgcaataactagggcaatgaaagttttg
actatcagctatgctcaagtgcgtaatatatttggtcgtagtagttttcaagttaagtca
cgttttctatcagagatagatgatgaacatttaaatgaaggtaagaatcattctataaat
atgctaaaaactaaaataaagcagaaatctaattttggtgtttcagcatttgattttctt
aagtcaaatagctctactagagacagttttaatcctggagatcgagtgtatcataaagtt
tttggtaaaggtctatttataaaagctcaatcgcaaggtacaaaaaagttttatactatt
aattttggtgatgatgttggtcaaaaaattcttttagcagatatagcaaatcttgtgaaa
atctaa
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