Francisella halioticida: CDV26_06030
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Entry
CDV26_06030 CDS
T04972
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fha
Francisella halioticida
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fha03016
]
CDV26_06030
Enzymes [BR:
fha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CDV26_06030
Transfer RNA biogenesis [BR:
fha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDV26_06030
Prokaryotic type
CDV26_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ASG67999
UniProt:
A0ABM6LZN8
LinkDB
All DBs
Position
complement(1117589..1118362)
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AA seq
257 aa
AA seq
DB search
MKNYLLQVEYFGKNYCGWQRQSHSPSIQEELEKTLSKIANHNIVVTCAGRTDTGVHATSQ
VVNFHSDADRSLNAWQRGINALLPKDIKILNIKEVRNEFNSRFSAKNRTYNYIIYNSTIS
SPIFAEHSLWENRKLDILSMNQACKYLLGEQNFSSFRSSQCQSNTPFRNIKKAEFIKQGD
FIVFEVVGNAFLHHMIRNLVGSLLKVGLGLKSSEWIKELLDAKDRTQAAETTKAHGLYFV
GVEYQDFQFKRQVINLF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatttattacaggtagagtattttggtaaaaactattgtggctggcaaaga
caatctcattctcctagtatccaagaagagcttgaaaagactttatctaagattgctaac
cataatattgtagtaacttgtgctggtagaacagatactggtgtacatgctacctctcaa
gtagttaattttcactcagatgctgatagatccttaaatgcttggcaaaggggaataaat
gctctactacccaaagatattaagatattaaatattaaagaggttcgtaatgagtttaac
tcaagattttctgcgaaaaatagaacatacaactacattatatataattcaactataagt
tctcccatttttgcagagcatagtttatgggaaaatcgtaagcttgatatactaagtatg
aatcaagcctgtaaatatcttttaggagagcagaattttagttcttttagatcatcacaa
tgccaatctaatacaccttttagaaatattaaaaaagctgagtttattaaacaaggtgat
tttatagtttttgaagtagttggaaatgcttttctacatcatatgattagaaatttagtt
ggatcattactaaaagtaggcttaggtctaaaatcatcagaatggataaaggaactttta
gatgcaaaagatcgaacccaagcggctgaaactactaaagcgcatggtctatattttgtt
ggggtagaatatcaagattttcagtttaagcgtcaggtaattaatttattttaa
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