KEGG   Francisella halioticida: CDV26_07170
Entry
CDV26_07170       CDS       T04972                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
fha  Francisella halioticida
Brite
KEGG Orthology (KO) [BR:fha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fha03032]
    CDV26_07170
   03036 Chromosome and associated proteins [BR:fha03036]
    CDV26_07170
   03400 DNA repair and recombination proteins [BR:fha03400]
    CDV26_07170
DNA replication proteins [BR:fha03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CDV26_07170
Chromosome and associated proteins [BR:fha03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CDV26_07170
DNA repair and recombination proteins [BR:fha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CDV26_07170
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ASG68199
LinkDB
Position
complement(1339289..1339561)
AA seq 90 aa
MNKSELVSAIAKEADVTKEVAGNTLDATIDAVTKALKKGDSVTLVGFGTFQVKERSAREG
RNPKTGETIQIAASKVPSFKAGKGLKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaagtgaactagtgagtgctatagctaaagaagcagatgttactaaagaagtt
gctggaaatactttagacgctactattgatgcggtaactaaagctcttaagaaaggcgat
agcgtaacacttgtgggatttggtacctttcaagttaaagaaagaagtgctagagaaggt
agaaatcctaaaacgggcgaaacaattcaaattgcagcttctaaagttccaagctttaaa
gctggtaaaggtcttaaggatgcggtaaaataa

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