Francisella halioticida: CDV26_08075
Help
Entry
CDV26_08075 CDS
T04972
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fha
Francisella halioticida
Pathway
fha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDV26_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fha03021
]
CDV26_08075
03400 DNA repair and recombination proteins [BR:
fha03400
]
CDV26_08075
Enzymes [BR:
fha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDV26_08075
Transcription machinery [BR:
fha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDV26_08075
DNA repair and recombination proteins [BR:
fha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDV26_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASG68349
LinkDB
All DBs
Position
complement(1503124..1504080)
Genome browser
AA seq
318 aa
AA seq
DB search
MALENLLHPTNIKIDDYAKNATKFSFEALERGVGYTLGYALKQTMLYSVGGACVTSIKIN
DGKIASLEDVISCDETVADIILNVKALPVTLADSVETGKIIFELFGSEEEIFSEEAKLSE
GLKITEEVFICSYNGGRRLKIEAKVEKGIGYRQASENFKDGEFLLDATFSPVTFCDFEVK
DARVGRRTDLDKLNFNIKTNGNITCEEALRLSATTIQNQLKNIVDVEEINQGIFVEDPTK
DIDPILLKHVEELNLTARSSNCLKAVNIRYIGELVQKTENELLKAPNFGKKSLTEIKQKL
SELGLSLGTSIDNWPEDI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcactagaaaatttactacatcctactaatattaaaattgatgactatgctaaaaat
gctactaagttttcttttgaagcgctagaaagaggtgttggctatacacttggttatgct
ctcaagcaaactatgctttattctgttggtggtgcatgtgttactagtataaaaattaat
gatggtaaaattgcatctttggaagatgtaatttcgtgtgacgaaactgttgctgatatt
attttaaatgttaaagctcttcctgtgacattagctgatagtgtcgaaacaggtaaaata
atttttgaactttttggttctgaagaagaaattttttctgaagaagctaagttatcagaa
ggtctaaaaataactgaggaagtatttatctgtagttataatggtggtagaagacttaaa
atagaagctaaagttgaaaaaggtattggctatagacaagcctcagaaaatttcaaagat
ggtgaatttcttttggatgctactttttcaccggttactttctgtgactttgaggttaag
gatgctcgtgtcggtagacgtacagatctcgataagctcaattttaatattaagacaaat
ggtaatattacttgtgaagaagctctaagactgtcagcaactacgatacaaaatcagcta
aagaatattgttgatgttgaagaaattaatcaaggtatttttgtagaagatccaacaaaa
gatattgatcctatattgttaaagcatgttgaagagctaaatttaacggctagatcatct
aactgtctgaaagcagtgaatattagatatattggtgagcttgtacaaaaaactgagaat
gagcttctaaaggctcctaactttggtaagaagtctttaacagaaattaaacaaaaatta
tcggaattaggtttatctcttggtacttcaatagataattggcctgaggacatctaa
DBGET
integrated database retrieval system
