Francisella halioticida: CDV26_09440
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Entry
CDV26_09440 CDS
T04972
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fha
Francisella halioticida
Pathway
fha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDV26_09440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fha03400
]
CDV26_09440
Enzymes [BR:
fha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CDV26_09440
DNA repair and recombination proteins [BR:
fha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDV26_09440
Prokaryotic type
CDV26_09440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASG68586
UniProt:
A0ABM6M115
LinkDB
All DBs
Position
complement(1781619..1782275)
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AA seq
218 aa
AA seq
DB search
MDWSEILSEEKQKPYFKQILDFLASEINSDKVIFPSKKNIFNAFKYTGLDNLKVVILGQD
PYHNYNQAHGLAFSVQEGVDVPPSLRNMYKELKNSIYGFDVPNHGCLTNWAKQGVFLLNT
TLTVEAHKANSHKDIGWQTFTDTVIEKISQHKEHIVFILWGLHARKKKSLIDSSKHLILE
STHPSPLSAHRGFLGCNHFKIANEYLSNIDQPIINWNL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtggattggtcagagattctttcagaagaaaagcaaaagccttatttcaagcaaatatta
gatttcctagccagtgaaataaatagtgataaagtgattttcccatccaaaaaaaatatt
tttaatgcttttaaatatactgggttggataatttaaaagtcgttatcctagggcaggat
ccctatcataactataatcaagctcatggattagcattttctgtgcaagaaggtgttgat
gtaccaccatctttacgaaacatgtataaagaattgaaaaatagtatatatggatttgat
gttccaaatcatgggtgtttaacgaactgggcaaagcaaggagtttttcttttaaataca
actcttacagtagaagctcacaaagctaattcacataaagatattggttggcagacattc
actgatactgttatagaaaagatctcacagcataaagaacatattgtatttatcttgtgg
ggattacatgcacgcaagaagaaaagtcttattgatagttcaaaacatttgatattagaa
tcaacacacccatcacctttatctgctcatagaggttttttaggttgtaatcatttcaaa
atagctaatgagtatcttagtaatattgatcaaccaattataaactggaatctttga
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