Francisella hispaniensis FSC454: FSC454_02305
Help
Entry
FSC454_02305 CDS
T04700
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03030
DNA replication
fhi03430
Mismatch repair
fhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSC454_02305
03430 Mismatch repair
FSC454_02305
03440 Homologous recombination
FSC454_02305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fhi03032
]
FSC454_02305
03400 DNA repair and recombination proteins [BR:
fhi03400
]
FSC454_02305
Enzymes [BR:
fhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSC454_02305
DNA replication proteins [BR:
fhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSC454_02305
DNA repair and recombination proteins [BR:
fhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSC454_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APD50054
UniProt:
A0AAC9NPC5
LinkDB
All DBs
Position
450745..454224
Genome browser
AA seq
1159 aa
AA seq
DB search
MISHLRVHTGFSVVDSTVRLSDLFARAKDKNIAAVALTDVCNLFAAVKFYKQALASRIKP
IFGVELKVDTEFGVCDLVLLAENNQGYQNIVNLVSKAYQEADRFGSIPLIPKSWLGEVKL
ESVICLNGGQQGELGKAILTKDYRKADEIINQNVEIFGANNYIIEIHKLEYENEGLYNQK
ALEYASKYNLIAVATNLTVFMEADDYDIHEIRACINEKTTILDESRKSKFTKEQYLKSAE
EMYETFSALPVLVDNTLAIAKRCNVIFELGKPCLPTVDIPAGLTEKEYFSKLCYQGLDKR
LEKILANRPADKHEHIIKVYKDRLQREIDIICDMGFSGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKESVAQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFNKILKEGEPL
YDEMQADEEVAEIIERAQKLEGLPRSLGKHAAGIVISPTKISDFAPIYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIINNTIKSINAKRPADQKPLDIADIPLDDQKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKQIAYL
HPLLEEVLKETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIDAKLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGITVLAPNVNKSVYDCIAISKGTILLGLGAIKGLGGEAIKS
ILTERDAEGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISRNRATAFNSIEKAIKN
AGYVNEMNAAGQDDLFGFTEQESDTDTELEKECIVEEWSLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLNKIQQPNIDGNSVRIIASMITPAIRRKTKIGKVLYIINIDDEFDR
ADCLISEEVFASVKDSIQVDDIVVVEGKVSRDVQRECNKLSVDKVQPISQYIDENFSKVE
LTLRSQNVNPTNLKKVLSNLKENIASTNIQKQNILEITISLDDVDGKFDYLQKPFSIYKF
VNDVSKLIAEGSTVSLSGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatctaagagttcatactggattttctgttgttgatagtacagtacgccta
agtgacctttttgcaagagcaaaagataaaaatattgctgcggtggctctcactgatgta
tgtaatttatttgctgcagttaagttttataagcaagctttagctagtaggattaagcca
atctttggagttgagctaaaggttgatacagaatttggtgtatgtgatttagtattatta
gcagagaataatcaaggttatcaaaatattgttaatctagtttcaaaagcatatcaagaa
gctgataggttcggttcaattcctcttatacctaaatcttggcttggcgaggtaaaacta
gaaagtgtcatttgtttaaatggtggccagcagggagagctaggcaaagctatcttgact
aaggattatcgcaaggcagatgagattattaatcaaaatgttgagatattcggagccaat
aattatattatcgagattcataagttagagtatgaaaatgagggtttgtacaatcaaaag
gctctagaatatgctagcaagtataatctcatagctgtagcaacaaacttaaccgtattt
atggaagcagatgattatgatattcatgaaattagagcttgtatcaatgagaaaacaact
atcttagatgagtcacgtaaatctaaatttactaaagaacagtatctaaaatcggctgaa
gaaatgtatgaaactttttctgcactgccagtgcttgtagataatactctagctattgca
aagcgttgtaacgttatatttgaattaggcaagccgtgtctgcccacagtagatattcca
gcaggtttgacagaaaaggagtacttctcaaagttatgttatcaaggattagataagcgt
ttagaaaaaatattagcgaataggccagctgataagcatgaacatatcataaaagtttat
aaagataggttacaacgtgagattgatatcatttgcgatatgggattctctggttacttt
ctaattgttgaggattttattaggtggtcaaaagaaaatgatatcccagtaggaccaggg
cgaggctctggcgcggggtcgttagtagcgtattctttgttaattactgatatagatcca
ttaccttatggattactttttgagaggtttttgaatcctgaaagggtatcgatgcccgat
tttgatatagatttttgtatccaaggtagagatagagttatcaagtatgtagagcaaaaa
tatggcaaagagagcgttgcacagattattacctatggtacgatggctgctaaaggtgtt
gtacgagatgttgtaagagtaatggggcaaagttttggttttggtgataggatcgcaaag
cttattccagaaacaccaggcacaacttttaataagatcctaaaagaaggcgaaccatta
tatgatgaaatgcaagcagatgaagaagttgctgagattattgaaagagcccaaaaacta
gaaggcttaccacgtagtttaggtaaacacgctgcaggtattgtaatttcgccaacaaaa
atttcagattttgcacctatatattgtgaggataagggcggtgatattgtaactcaattt
gataaaggcgatgttgaagatgttggcctagttaagtttgactttttaggactaaaaaac
ttaacgattatcaataatactattaaaagcattaatgctaaaagaccagctgatcaaaaa
cctttagatatagctgatatacctttagatgatcaaaaaacatttaagcttttgcaagct
ggtaataccacaggaatatttcagcttgaatcacaaggtatgcgtcagattgtcaaggat
cttggaacttctaattttgaagagattatcgccttagtagcactatatcgtcctgggcca
atggagaatatcccaacgtttatcgaccgtaagcatggtagaaaacagattgcctactta
catcctttacttgaagaagtactaaaagagacttatggtatcccagtatatcaagagcaa
gttatgcagatggcacaaaaacttgctgggtatactcttggtggtgcggatttattgcgt
cgtgctatgggtaagaaaaaacctgaagaaatggagcagcagcgtaaaatttttaaagag
ggcgctgctaaataccacaatatcgatgccaagcttgctgatgagatatttgaccaaatg
gaagcttttgctggttatggtttcaacaaatcacatgctgctgcctatgcactaattgct
tatcaaaccgcttggttaaaagcacattatcctgatgaatatatggctgctcttatgtct
ggagatatggggaatactgaccagcttgttaaatttatcctagattgtaaaaatatgggt
attacagttctagcacctaatgtaaacaaaagtgtctatgactgtatagctatttcaaaa
ggtacaatcttgcttggcttaggagctatcaaaggacttggtggcgaggctattaaaagt
atccttacagagagagatgctgaaggagagtttagttctatatttgatctgacacgtaga
gtagatttacgtaaggttaataaaaaagctcttgaagcactctgctttgcaggagctatc
aaagatatatctagaaatagggctacagcatttaactctatcgaaaaagctatcaaaaat
gctggttatgtcaatgaaatgaatgctgcaggacaggatgatttatttggctttacagag
caagagagtgatactgatacagagcttgaaaaagaatgcatagtagaagagtggagtcta
aaagagctacttattaatgagaaaaaagctttagggatgtatttttctggacatattatt
gatgaagagagccattggcgcaatcatgttagctttagtgatcttaataaaattcagcaa
ccgaatattgatggtaattctgtgagaattatcgcaagtatgataacaccagctatacgt
cgaaagactaaaataggaaaagttctatatattatcaatattgatgatgagtttgataga
gctgattgtctaattagtgaagaggtttttgctagtgttaaagatagtattcaagttgat
gatattgtggttgtagagggcaaagttagccgtgatgtgcaacgggagtgtaataagcta
agtgttgataaagtccaaccaatatcacaatatattgatgaaaattttagtaaagttgaa
ctaacattaagaagccaaaatgtaaatccaactaatctcaaaaaagtgcttagtaatctc
aaagaaaatatagcctcaactaatatccaaaaacaaaacattttagagataacaatttct
cttgatgacgttgatggtaagtttgattatttacaaaagccattttctatctacaaattt
gtcaatgatgttagcaagctaatagctgagggtagtacagttagtttgagtggagtttga
DBGET
integrated database retrieval system
