Francisella hispaniensis FSC454: FSC454_02690
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Entry
FSC454_02690 CDS
T04700
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSC454_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhi03400
]
FSC454_02690
Enzymes [BR:
fhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FSC454_02690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FSC454_02690
DNA repair and recombination proteins [BR:
fhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FSC454_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
APD50123
UniProt:
A0AAC9J9B4
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All DBs
Position
complement(549240..550064)
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AA seq
274 aa
AA seq
DB search
MPELPEVETVKRGLIKNIIDKKILDIEINTDKLRYAIDKDQLVKIKNKIVKQIQRRGKHL
IVVIEDDLQLIIHLGMSGVIKVIDSTNYNKIKHDHIVVTLSDNLSLVYNDPRKFGYWLVN
TNHTPLEHRVLVSHGVEPLTADFNSDYLLSKLKQTSRKIKQTIMDNNIVVGVGNIYASEA
LFDSNILPIRGSNTITKKEAEKLVSSIKKILEKAIVQGGTTLKDYKNTEGKPGYFAQQLN
VYGRANQQCYVCNTRIESLVIGQRNTFFCKKCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtagaaacagtaaaaagaggcttaattaaaaatattatcgac
aaaaaaatacttgatattgagattaatacagataagcttcgttatgctattgataaagac
cagttagtaaaaattaaaaataaaatagtcaagcaaattcaacgtagaggcaagcactta
atagttgtcattgaggatgatttacaattaattatccacttgggcatgtctggagttatt
aaggttatagactcaacaaactacaataaaatcaaacatgatcacatcgttgtaacgcta
tcagataatctatctttagtttacaatgatccacgcaaatttggctattggttagtaaat
actaatcacacaccgcttgaacatagagttttagtatcgcatggtgtcgaacctttaaca
gctgattttaatagtgattatctactttctaaactcaagcaaacctctagaaaaatcaag
caaactattatggataataatattgtcgttggtgttggtaatatttatgctagtgaagcg
ctatttgatagtaatatcttaccaataagaggatctaatactattactaaaaaagaagca
gagaaattagtgtcttctattaaaaaaatacttgagaaagctattgttcaaggtggaacc
acacttaaagattataaaaatactgagggtaaacctggttattttgctcaacaattaaat
gtctatggtagagcaaaccagcaatgctatgtatgcaatacaagaattgaaagtttagtt
ataggtcagagaaatacttttttctgtaaaaagtgtcaaaaataa
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