Francisella hispaniensis FSC454: FSC454_03115
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Entry
FSC454_03115 CDS
T04700
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FSC454_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhi03400
]
FSC454_03115
Enzymes [BR:
fhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FSC454_03115
DNA repair and recombination proteins [BR:
fhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FSC454_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Lys
AAA_22
HPD
Motif
Other DBs
NCBI-ProteinID:
APD50199
UniProt:
A0AAC9J4P4
LinkDB
All DBs
Position
634859..638479
Genome browser
AA seq
1206 aa
AA seq
DB search
MKNLDANTITLQGRHIIEASAGTGKTFNITELYIRLLLEQRSGNRLLPKDILVMTFTKDA
TQEIIGRVEAKIRDVLEDISEGKEVKVSIKGQETLIQKGDQNYKHLKRSLLEIDEAAIFT
IHGFCKKVLSEQAFASGMEMDVSMEVDTSDILQKVVEDFFRKHINKNKTNFEYLQTYKLH
TPDMFLDKLRNVARSSYELLTKQAMSLDEFKILKKQQLELFLNNQSIVDDFLSKLGKDEP
EGKRVDEYHRVLEWLKLDNQILFPDDISIITDGRKISAKLIKPIFIGVKELRDLQEEIKR
ANAAQFIKQACLKIRQDFIKAKEQKGVLDFDDLITKLCHSVKKSPDLVKTLQHQYPVALI
DEFQDTDAEQYEILDTIYPQSNKIPHPPLERDADRRGVVSVTDTPSSQRGIDDLLLLMIG
DPKQAIYGFRGGDIFTYLKAKDSCSNDNQWSMDTNWRSTREMIKAYNRLFYKQDYQPEEA
GQIGTNIFSDGIGYQLVKASPNADKKAKDFDDKLKPINYFYYQVAEDDNKSDIDSNLSVW
TANEIVRLLNSKKVVESDIAILVENGTQAKIIQKALQAKKLSSVYLSQRDNVYHSQEAKE
ILALMEGINDLENKSMLKRALSTSLLGGSADKFIRYIDENDVSAWDEEIEKAKSLRQQWH
KYGFMAFIIQIIHENFIQRSDSKERVITNILHLAELIKVAENKYKHPNQLIKWYRQQLNS
SATSEGELRLESDDNLIKIITIHGSKGLEYSVVFIPFASYVSKRKFETSDFSKYYDKNLK
QTVYKIGKDDSIKPQIENEVIEELMRLFYVAVTRAEHRCYIGVAKYQDKKSDISFRSPLA
RFLDYQKDDNWLEKIQNITANPTNQSLLIDIATSHSYESENLITNDQFDHDALQNLKAND
INKLLNDSWEMLSFSKISKSKVENTALEKENDESEDDSAQKSQQELEFRFTASKGADIGN
ILHNVLEHTDFSLGKIDDNLLQEQMDRYKVVAAEDFDNLKVWLEECLVASIPFIETKTFS
SNDNIQYGLFDINNKDFCLKDIPNTKTLKEAEFYFPIANEKLYKKNIIEILAEYRNQTID
YDEFASQKIFGMLHGFIDLIFEHDGKFYVADYKSNYLGDTLEDYNQQTMQEKNQSSFYDL
QYLIYSVALDKYLRQNIESYNYEKHFGGVYYFYLRGMKDGYGVYRARPNLEIINKLASLF
NGDDNV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctagatgcaaacacaataaccctacaaggtcgccatattatcgaggctagt
gctggtactggtaagacttttaatattaccgagttatatattcgtttacttcttgagcag
aggtcgggaaatagattattacccaaagatatccttgtaatgacatttaccaaagatgct
acccaagagattatcggtagagtagaagctaagattagagatgtactagaggatatttct
gaaggcaaagaggtcaaagtttctataaaaggacaagaaacactgatacaaaaaggtgat
caaaattataagcatcttaaaagatcattacttgagatagatgaagcagctatttttacc
attcatggtttttgtaaaaaagttctaagtgagcaagcttttgctagtggtatggagatg
gatgtctctatggaggtcgatacttctgatattttacaaaaggtagtagaggattttttt
agaaaacatatcaataaaaacaaaaccaattttgaatatttgcaaacatataagctacat
actccagatatgtttttggataagttaagaaatgttgctaggtccagttatgaactttta
acaaagcaagctatgagcttagatgaatttaaaatactcaaaaagcaacaactggaatta
tttttaaataatcaaagtattgtggatgactttttatctaaattaggaaaagatgagcca
gagggcaagagagtagatgagtatcatagagttttagaatggttaaaattagataatcaa
atactattcccagatgatatatctataattacagatggcagaaagataagtgcaaaacta
ataaaaccgatttttattggtgtaaaagaattaagagacttacaggaagaaataaagcga
gcaaatgcagctcaattcatcaaacaagcttgcctaaaaattcgtcaagattttataaaa
gcaaaagaacaaaagggtgttttagattttgatgatttgattactaaactttgtcatagt
gtcaaaaagtctccagatttagtcaagactttacaacatcaatatccagttgctcttatt
gatgagtttcaagataccgatgctgagcagtatgagattttggatactatctatcctcag
agtaataaaataccccatccccctcttgagagggatgccgataggcggggtgtggtgtct
gtgactgacaccccttcgtcccaaagaggaatagatgatttgttattgctaatgataggc
gatccaaagcaagcaatttatggttttagaggtggagatatttttacatatttaaaagct
aaagatagttgctctaatgacaatcagtggagtatggatactaactggcgctcaactaga
gagatgataaaagcttacaatagacttttctataaacaagattatcagccagaagaagcg
ggacaaattgggactaatatttttagtgatggtataggctatcagcttgtcaaagcatca
ccaaatgctgacaaaaaagcaaaagactttgatgataaacttaaaccaataaattatttc
tattatcaagtggccgaagatgataataaaagtgatatcgatagtaatttatcagtatgg
acagcaaatgaaatcgttagactattaaattctaaaaaagttgtagaaagtgatatcgca
attttggtagagaatggcacgcaagcaaagattattcaaaaagctttacaagctaagaaa
ctaagctcagtatatctaagccagcgcgataatgtctatcatagccaagaggctaaagaa
atattagctcttatggaaggtataaacgatcttgaaaataaatctatgctaaagagagca
ttatcaactagtttacttggtggtagtgccgataaatttattagatatattgatgaaaat
gatgtctcagcatgggatgaagagatagaaaaagctaaatctctaagacaacaatggcat
aaatatggttttatggcatttattatccagattatacatgagaacttcattcaaagatca
gattcaaaagagcgtgttatcacaaatattctccatttggccgagcttataaaagtagct
gagaataaatataaacacccaaatcaattaattaagtggtaccgtcaacagttaaatagt
tcagctacaagtgagggcgaacttagattagagagtgatgataatctgattaagataatt
acaattcatggctcaaaaggacttgagtattcagttgtatttataccatttgcaagttat
gtaagtaaaaggaaatttgagacaagtgatttctctaaatactatgataaaaatcttaaa
cagacagtctataaaattggtaaagatgacagtataaaaccacagatagaaaatgaggtt
atagaggagttgatgcgcctattttatgtggctgttacacgtgcagagcatagatgctat
attggagttgcaaaataccaagataaaaaatctgatatttcatttagaagtccattagca
aggtttttagattatcaaaaagatgataattggttagagaaaatccaaaatataacagca
aatcctactaatcaaagcttgcttatagatatagctacaagtcattcttatgaaagtgag
aatctaattacaaatgaccaattcgaccatgatgctttacaaaacctcaaagcaaatgat
attaataagttattaaatgatagttgggagatgttgtctttctcaaaaatttcaaagtca
aaagttgaaaatactgcattagaaaaagaaaacgatgagtctgaagatgatagcgctcaa
aaatctcagcaggaattggagtttagatttacagcttccaaaggagcagatattggtaat
attttgcataatgttttagagcatacagattttagcctaggtaagatagatgataatctt
ttacaagagcaaatggatagatataaagtagttgctgcagaagattttgataaccttaaa
gtatggttagaagagtgtttagttgcatctataccttttatagaaactaaaacttttagt
tctaatgataatattcaatatggtttgtttgatatcaataataaagatttttgtctaaaa
gatattccaaatacaaaaaccttaaaagaagcagagttttattttcctatagcaaatgaa
aagttatataagaaaaatattatcgaaattttagcagaatatcgtaatcaaactattgat
tatgacgaatttgcaagtcaaaagatttttggtatgcttcatggttttattgatttgatt
tttgaacatgatggtaaattttatgtggcagattataagtcaaattatttaggtgatact
ttagaagattataatcagcagactatgcaagagaaaaatcaaagtagtttttatgatttg
cagtatctgatatatagtgttgctttagataagtacctgcgacaaaacattgaaagttat
aattatgaaaagcattttggcggagtatattatttctatcttagaggtatgaaagatggc
tatggagtttatcgagctagaccaaatttagagattatcaacaaacttgctagtttattt
aatggagatgataatgtataa
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