Francisella hispaniensis FSC454: FSC454_03120
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Entry
FSC454_03120 CDS
T04700
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FSC454_03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhi03400
]
FSC454_03120
Enzymes [BR:
fhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FSC454_03120
DNA repair and recombination proteins [BR:
fhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FSC454_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
UvrD_C
SLFN-g3_helicase
ResIII
DEAD
PhoH
nSTAND3
Flavi_DEAD
RecD_N
PIF1
ATP-synt_ab
TrwB_AAD_bind
AAA_12
SRP54
TIP49
AAA_24
NACHT
AAA_33
Terminase_6N
AAA_28
AAA_7
T2SSE
AAA_5
AAA_16
CbiA
Motif
Other DBs
NCBI-ProteinID:
APD50200
UniProt:
A0AAC9NN76
LinkDB
All DBs
Position
638472..640244
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AA seq
590 aa
AA seq
DB search
MYKTFHQACEQLADIRAIDFFFAKEVFDLVKKTIPSMTTLSSESYLPLHGAKGNDLEQKS
NEILFHILMKLMHVYSHGHSCLKIADISNKTIFALEQTNQSDAKVGFKIPSFDEIVSILD
SLNYDDLPIHFAKQYDSLYIKRFWNYENEMANFIKLRTVQNTQKDNYIEEVVDKLFEPIN
EIDWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQILNQNQQRIALLAPTGKAAQ
RMTKSLNSALSKRADSDSYLGLSNLEAQTIHRFLGLRPNSTYVKYNKQSKAPYDVIIVDE
ASMLDMNIFIKLIRAVADNTKLILIGDTNQLPSVEAGSLLANFTHHRDGSITPYTTLLIK
NYRSRQYINNLAASVLKGDINIDSHQNENISFHSQRNLDTYLKEYAKRYSKLEKCSDYKE
ALIELNKFRILVANKNLEIGTDKLNQKIEKFMSKPIDSNYKGKPIMITQNSYSLGLFNGD
VGIIWPDDTGKLRAYFDGKDTKAFSLNMLPKYESVYAMTIHKTQGSEFDEIVIILPAEDN
EALSKQLLYTAITRAKHKLTIISEQSSLIDIAQKDIKRNSNISELVSLSN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtataagactttccatcaagcttgtgagcaattagcagatattagagctatagatttt
ttctttgctaaagaggtgtttgatttagtcaaaaagactatcccgtctatgaccacttta
tcaagtgagtcatatctaccccttcacggagcaaaggggaatgatttggaacaaaaaagt
aatgaaattttatttcatattttgatgaagcttatgcatgtgtatagccatggtcatagc
tgtttgaagatagcggatatatcaaataaaactatttttgctttagaacaaaccaatcaa
agtgatgctaaagtaggctttaaaattccaagttttgatgaaattgtaagtattttagat
agtttaaattatgatgatttacctatacattttgccaaacagtatgattctctatatatc
aaaagattttggaattatgagaatgaaatggctaactttataaaattaagaacagtccaa
aatactcaaaaagataactatattgaagaagtcgtagacaaactatttgaacctattaat
gagatagattggcaaaaacaggcagttatcaaaagtctaaattataattttagtattatc
tcaggtggaccaggcacaggtaagacaactacagttgcaaaacttttacttgctatacaa
attcttaatcaaaatcagcaaagaatagcgcttttagcaccaacaggtaaggctgctcag
agaatgacaaaatccttaaatagtgcattaagtaaaagggcagatagtgatagttattta
ggattatctaatttagaagctcaaactatacatagatttttaggtttacgaccgaattct
acttatgttaaatataacaaacaatcaaaagcaccatacgatgtgatcattgttgatgaa
gcttcgatgctagatatgaatatttttattaagttgattagagcagtggccgataatacc
aagttgatactaataggtgatactaatcagttaccctcagttgaggcaggaagtctacta
gcaaattttacacaccatagagatggtagcattacgccatatacaacattacttatcaaa
aactatcgttcacgacaatatataaataatcttgcagcctcagttttaaaaggagatatt
aatattgatagtcaccaaaatgagaatattagttttcatagtcaaagaaatttagatact
tatctaaaagagtatgcaaagagatattcaaagcttgaaaagtgcagtgactataaagag
gctcttatcgagctaaataaatttagaatacttgtagctaacaaaaatttagaaattggt
acagataaattaaatcagaaaattgagaagtttatgtctaaacctatagattctaactat
aagggtaaaccaattatgataacccaaaatagttattcattaggtttatttaatggagat
gtagggattatttggccagatgatactggtaaacttcgtgcatattttgatggcaaagat
actaaggcatttagcctaaatatgctaccaaaatatgaaagtgtctatgctatgacaatt
cataaaactcaaggttcagagttcgatgaaattgtaattattcttccagcagaagataat
gaagcgctaagtaaacaacttttgtatacagctatcactagagcgaaacataaattaaca
attatatctgaacaaagtagcttaatagatatcgctcagaaagatattaagagaaattca
aatattagtgaattagttagcttgagcaattaa
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