Francisella hispaniensis FSC454: FSC454_05290
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Entry
FSC454_05290 CDS
T04700
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSC454_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhi03019
]
FSC454_05290
Enzymes [BR:
fhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSC454_05290
Messenger RNA biogenesis [BR:
fhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSC454_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
MerR-DNA-bind
HI1480
AAA_22
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
APD50581
UniProt:
A0AAC9J5A8
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All DBs
Position
1091697..1093034
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AA seq
445 aa
AA seq
DB search
MQFSDLGLNPLICSALEKKGYTKPTPIQAKAIPLVLKGSDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNALKFDSLNTFVLDEADRMLDMGFINDLKRIHKLLPKKLQ
TLMFSATFSLEIKNLANDFLDNPQSVSADVVNTTVKKITQKIYTLDKSNKINALISLIKD
QDLHQVLVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKEINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSRKTKAKKIDEVKIIAAKRANKNNKNTNQKKSSNH
NIDFAKKIRQKIHQNKSVRKPKAQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagatttaggtttaaaccccttaatatgtagcgctttagaaaaaaaaggc
tatacaaaaccaactccaattcaagcaaaagcaataccattagttctaaaaggtagtgat
gtcatggcatcagctcaaacaggtacaggcaagacagcgggctttacattaccaattatc
caaagacttcttgatcaaccaaaagctcaagcaaatcgaatcaaaactttgattttaact
cccacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catatccgttcagcagtagtttttggtggagtgagtattaatcctcaaatgatgaaatta
cgtaaaggtgttgagattttgatagctactcctgggagattactagacttatatagtcaa
aatgctcttaaattcgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaagaatccataagcttttaccgaaaaagttacaa
acactaatgttctcagctacattttcactagagataaaaaatcttgctaatgattttctt
gataatcctcagtcagtatcagctgatgttgtaaatacaacagttaaaaagattactcag
aaaatttatacgttagataaatcaaataaaattaatgctttgatttcattaataaaagat
caagatctacatcaagttttggttttttcacgtacaaagcatggtgctaataagatatca
gagaaactaaataatgctggtattacaagtagcgcaattcatgggaataaaagccaaaca
gctagaacaaaggcattagcagattttaaatccaaggaaataaacgttttagttgctaca
gatatagcagctcgtggaattgatattgcccaacttccttgtgtgataaatcttgatcta
ccaaatgttgctgaagattatgtccatagaataggtagaactggcagagcagggcaagat
ggtctagctatttctttagtaagtgcagatgaagttgaatcactatcaaatatagaacat
ttaattgggcatcttttaccaagagaagagttagaaggttttgaggctactcataatgtt
cctattacaagcatgtcacgcaaaactaaggctaaaaaaattgatgaagttaaaataata
gctgcaaagagagcaaataaaaataataaaaacactaatcaaaagaaaagctcaaatcat
aatatagattttgctaaaaaaatcagacaaaaaattcatcagaataaaagtgttagaaag
ccaaaggctcaagattaa
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