Francisella hispaniensis FSC454: FSC454_08235
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Entry
FSC454_08235 CDS
T04700
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fhi
Francisella hispaniensis FSC454
Pathway
fhi03420
Nucleotide excision repair
fhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FSC454_08235 (uvrD)
03430 Mismatch repair
FSC454_08235 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhi03400
]
FSC454_08235 (uvrD)
Enzymes [BR:
fhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSC454_08235 (uvrD)
DNA repair and recombination proteins [BR:
fhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSC454_08235 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FSC454_08235 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
DUF4252
SseB_C
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
APD51064
UniProt:
A0AAC9J5Y8
LinkDB
All DBs
Position
complement(1686298..1688520)
Genome browser
AA seq
740 aa
AA seq
DB search
MSNYDFILGLNPEQQKATLLEDRNALILAGAGSGKTKVLTSRIAYLCRDKGISVENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGVAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVINNLDLDDKKYPPKLLQNFINKQKDKAIRSNKLTKQYDVNYAHIYTAYEERLQL
DNALDFADLLLHLYELFSLNQQLREYYQNKFKYILIDEFQDTNHVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAIVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVELYCAVNERDEAKYIIDKIRNLHSDGIKYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIELINTISSQINDLSLDKLLEM
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQMELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIVNSEEVFDNTDSKKMQ
DKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFVAEIDSQHLNQGKLEFT
AAKPKTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFIKAQAQGTKEFYTVD
FGLDVGQKILLADIANLVKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattatgactttattttaggattaaatccagagcaacaaaaagctacattacta
gaggatcgtaatgctttgattctcgctggtgctgggagtggtaaaacaaaagttctaaca
tcacgtatagcttatctttgccgtgataaaggcatatctgtcgaaaatattcttgctgta
acatttaccaataaagcagcaaaagagatccagcagcgtgttgaaaagatgcttgggatt
tctacttttggtatgtggataggtacttttcatggtgtagctcataggttattacgcaag
catgcccatgaacttggtttggataagaactttaggatacttgatcaagatgagcaagct
caattgattaaaaaagtaattaataacctagatcttgatgataaaaaatatccgcctaaa
ttactgcagaattttatcaataaacaaaaagataaagctattcgtagtaataaattgaca
aagcagtatgatgttaattatgcgcatatttatacagcttatgaagagagacttcagctt
gataatgctttggattttgccgatttgcttttacatctttatgagcttttttctcttaat
caacagcttagagaatattatcaaaacaaatttaaatatattttgattgatgagtttcag
gatactaaccatgttcaatacatgtggttaaagctacttgtaactgataataactatatg
atggccgttggcgatgacgatcagtcaatatatggttggcgtggtgctatagtagataat
attcataactatgtaaaagatctcaaaaatgttgagattataaaactagagcaaaactat
cgctcaacgaagaatattcttaaagtagctaattcagtaattaaaaacaatgataatagg
atgtcaaaagagctatggtcagcagctgaagatggtgaaaaagtagagctttattgtgct
gttaatgagcgtgatgaggcaaaatatatcatagataaaattcgtaacttgcatagtgat
ggtattaagtatagtgatatagcaattttatatcgctcaaactatttgtcgcgtgtcctt
gaggagagctgtatttatgcgagtataccttataggatttatggaggttttcgtttcttt
gatcgagcagagattaaggatgctttagcatacctaaggctagctgttacaaatagtgat
aatttagcatttgagcgaattattaatacaccaacacgaggaattggcaacaaaacctta
gatacaattcgaaatttctcacagatcaataatgtctcatattggcaagctactatagat
attatccaaaaagaaattgtaacaaaaaggacagcatctcttctgttaaagtttatagaa
cttataaatactatttcatcacaaataaatgacttaagtctagataagcttcttgaaatg
gtaatcaacgaaagtggtttattggcgtcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttgataagtgcggctaaagattttgaaccgcaaatg
gagctacttgatgataatactgatatactacaagatttcttgtcatttgctgttctagaa
gctggtgagatgcaagctgatgaaaatacagatagtgttcagttaatgacaatacatgca
tcaaaaggtttagagtttcgctacgtctttttagttgctgcagaagaaggagttttccct
ccaagttcaattgttaactctgaagaggtatttgataatacagactctaaaaaaatgcaa
gataagcttgctgaagagcgtcgccttttttatgtcgcagtaacaagagctatgaaagcc
ttaactataagttatgcacaagtacgtaatatctttggtcgtagtagttttcaagttaag
tcacgttttgttgcagagatagactctcagcatttgaatcaaggtaaactagagtttaca
gcagctaaacctaaaactaaacaaaaagcaaattttggaatgtcgccttttgacttcctt
aaatctaataatactactaatagttttaaaccaggtgataaagtatttcacaaggttttt
ggtaaaggagtatttatcaaagcacaagcacaaggaacaaaagaattttatactgtagac
tttgggttagatgtcggccagaagattttattggcagatattgctaatcttgttaaggtc
taa
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