Fructilactobacillus hinvesii: M3M39_02470
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Entry
M3M39_02470 CDS
T08844
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
fhin
Fructilactobacillus hinvesii
Pathway
fhin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fhin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M3M39_02470
09124 Replication and repair
03420 Nucleotide excision repair
M3M39_02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fhin03021
]
M3M39_02470
03036 Chromosome and associated proteins [BR:
fhin03036
]
M3M39_02470
03400 DNA repair and recombination proteins [BR:
fhin03400
]
M3M39_02470
Enzymes [BR:
fhin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
M3M39_02470
Transcription machinery [BR:
fhin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M3M39_02470
Chromosome and associated proteins [BR:
fhin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M3M39_02470
DNA repair and recombination proteins [BR:
fhin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M3M39_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
HBB
PhoH
Helicase_C
AAA_19
ENOX1
Motif
Other DBs
NCBI-ProteinID:
USS88360
LinkDB
All DBs
Position
complement(524144..526501)
Genome browser
AA seq
785 aa
AA seq
DB search
MVQKIGVRELVGFILRSGDLNSSLSSFNTPQAGTRIHKQLQRHRGSDYQAEVALKTEVEL
NGRPVLIHGRADGITTHDGQVEIEEIKTSDAEWGNLPTNQLTLYWGQVKLYAALLMRADP
DVSSVALTLTYVQTPDELIMREHQSISRTQALDFFTQVTAEYESWLALKEQLALDRVQTA
AQVSFPFPSYRKGQRELAAAVYKSAVLGKHLLLEAPTGTGKTISTLFPAVKAFATDQVER
LFYLTAKQSTRRVAEEALELLRQHGLRIQSITLTAKEQIQFPEEADLEPEQNPYFQGYYD
RLKPALKAILSERQHLTKAVVQDYARRYQLDPFEFSLDVSLFCDVIVCDYNYLFDPVVKL
QRFFTVENQQNFLLVDEAHNLVDRAREMYSTELTQTDCATLLQSLPRNQANRALRRRLQE
LLQQFERLQTELPTGKTTAERAKPDEVFTMAVTKSLDSLRRWLAKHPTDPLVETVQQFFL
TVTTYLKINDLFGDNFRWRIIMTEETVTVRIFCLDASPFIKAQLELARGSVLFSATLSPL
TYYQRVLGDNPKELKYQLPSPFNSNSQTILIATYINTTYNQRTNSLASIVASIHKLVTSK
QGNYLVFAPSYAYLDQIYQAYRKQYPHQLVQKQHPNMDANARDQFLAAFQQPETHPIVGF
ALLGGIFSEGIDLVGDRLIGVAIVGVGLPGLNTETNLIRDYFEQHNGRGFEFAYQLPGLN
HVFQAAGRVIRTIHDRGVILLLDRRFAEPRYRQWFPASWQQAQIVHNPAELTRQLQTFWQ
SQTDL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaaaaattggggtacgtgaactggtgggatttatcctccgcagtggcgattta
aacagttcgctgagtagttttaacacaccacaggccggcacgcgcatccacaaacaactt
caacggcaccgcggttctgactaccaagcagaggtcgcgttaaaaacagaggtcgaacta
aacgggcgccccgttttaattcacggccgggcggatggcattaccacccatgatggccag
gttgaaattgaagaaattaaaacttctgacgcagaatggggcaacttgcccaccaaccag
ctaactctctactggggacaagtgaaactctacgccgccctgttaatgagagccgatccg
gacgttagctcagtcgcactcacgctaacctacgtccaaactcccgatgaactaatcatg
agggaacaccaatcaattagccgaacccaggcactagatttctttacccaggttaccgct
gaatacgagagctggttggctctaaaagagcaactggcactggatcgggtgcagactgct
gcccaagtatcgtttccctttcccagttacagaaagggacaacgtgaactagctgcagcc
gtttacaagtcggcggtccttggaaaacacctcctgctggaggccccaactggcaccggc
aagaccatttcaacgctttttccggcggtcaaggcctttgctaccgatcaggtggagcgg
ctattttaccttacggccaagcaaagtacccgccgcgtagcagaagaagcgctcgaatta
ttgcgccagcacggcttgcggattcaaagcattaccctaacggccaaggagcaaattcaa
ttcccagaagaagcggaccttgaacccgagcagaatccttactttcagggctattacgac
cgtttaaagccggccttaaaggccattttaagcgaacgacaacacctcaccaaagcagtc
gttcaggactatgcccggcgttatcaacttgatccgtttgaattttccctggacgttagc
ctcttttgcgacgtcatcgtctgtgactacaactacctttttgatccggtggtcaagtta
cagcggttctttacggtggaaaatcagcaaaatttcttgttggtggacgaggcgcataat
ttggtagaccgggcccgcgaaatgtactctacggaactcacgcaaacggactgtgcgacc
ttattacagtcattgccacgtaaccaggccaaccgtgccctgcgtcgtcgcctccaagaa
ttacttcagcagtttgagcgactccaaacggaacttccgactggaaaaacaacggccgaa
cgagctaaaccagatgaagtcttcaccatggcggtcacaaagtcgctcgacagcctgcgg
aggtggttagccaagcacccgaccgatccgttggttgaaaccgtccagcagtttttcctt
acggtaacgacctatttaaaaattaacgatctgtttggggataactttcgctggcggatc
atcatgacggaagaaacggtcaccgttagaatcttttgcttagacgccagtccattcatt
aaagcccagctcgaactggcgcggggctccgtgcttttttccgccactttatcacctcta
acgtactaccaacgagtcttaggtgataatccaaaggagttaaaatatcaactcccctct
ccgtttaattccaattcccaaactatattgattgcaacttacattaatacaacttataat
caaagaaccaatagtttagcatcaattgtcgccagtattcacaaattagtcacgagtaaa
caggggaactacctcgtgtttgcgccttcctatgcctacctcgatcagatttatcaagcc
tatcgtaagcaatatccgcaccaactagtgcaaaagcaacacccgaacatggatgcgaat
gctcgtgatcagtttctagctgcctttcagcagccagaaactcatcccatcgtgggtttt
gccctcctcgggggtattttttcggaagggattgatctggtgggtgaccggttaatcgga
gtcgcaatcgttggcgtggggcttcccggtttgaacaccgaaaccaatctgattcgggat
tactttgaacaacacaacggccgggggtttgaatttgcttaccagttacccggattgaac
cacgtgtttcaagcggccgggcgggtcattcgtacgatccacgatcgcggagtcatctta
ctgcttgaccgccgctttgccgaaccccgttatcggcaatggtttccagccagctggcag
caggcgcaaatcgtgcacaatcccgctgaactcactcggcagttacaaactttttggcaa
tcacaaacagatttataa
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