Fructilactobacillus hinvesii: M3M39_03120
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Entry
M3M39_03120 CDS
T08844
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fhin
Fructilactobacillus hinvesii
Pathway
fhin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fhin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M3M39_03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fhin03021
]
M3M39_03120
03400 DNA repair and recombination proteins [BR:
fhin03400
]
M3M39_03120
Enzymes [BR:
fhin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M3M39_03120
Transcription machinery [BR:
fhin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M3M39_03120
DNA repair and recombination proteins [BR:
fhin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M3M39_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4249
Ig_GpJ_C
DUF211
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
USS88480
LinkDB
All DBs
Position
642450..643406
Genome browser
AA seq
318 aa
AA seq
DB search
MIEFEKPNIHKIEETNNYGEVVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSVQIDGVL
HEFSTVKGVTEDVTKIILNLKKLKLKIDGDDDQNETHTMSINVTGPADVTGADLSTDSET
TILNPDLHIATVAEGATLHMTVTANKGRGYVSAEENKARNDDMPIGVLPVDSIYTPIERV
NYQVEDTRVGQRDDFDKLTLDVWTNGSITPSEAISLAAKVLSQHLEMFVDLTDKAQQANV
MVEKEESHKEKMLEMSIEELDLSVRSYNCLKRAGINTVQELTDKSMADMMKVRNLGRKSL
EEIEQKLEGLGLSFRKED
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaagccaaacattcacaaaattgaagaaacaaataactatggtgaa
gtagttgtcgaaccattagaacgtggttatgggacaaccttaggaaactcgcttcgtcga
gttttgctagcttctttaccaggcgctgcagttaccagtgttcaaattgatggtgtttta
cacgaattctcaactgttaaaggtgtcactgaagacgtgactaaaatcattttgaacttg
aaaaagttgaagttgaaaatcgatggtgatgacgatcagaacgaaactcacacgatgagt
attaacgttactggtcccgccgatgtaaccggagctgatctatcaactgatagtgagacc
acgattttaaatccggacttacacattgcaacggttgccgaaggtgctaccttacacatg
acggtaacggctaacaagggccgtggttatgtatcagctgaagaaaacaaagctagaaat
gacgatatgccaattggcgtgttaccagtcgattctatctataccccaatcgaacgtgtt
aactatcaagttgaagatacgcgtgttggacagcgtgatgacttcgataaattgactctc
gatgtttggactaatggttcaattactccttctgaagcaattagtttagctgccaaggtg
ttatcacaacacttggaaatgtttgtggacttgactgacaaggcccaacaagctaacgtc
atggtggaaaaagaagaaagccataaagaaaaaatgctcgaaatgtcaattgaagaactg
gatctttccgttcgttcttacaactgtttgaaacgagctgggattaataccgtgcaagaa
ttgaccgacaaatccatggccgacatgatgaaagttcgtaacttaggacgcaagtccctc
gaagaaatcgaacagaagttagaaggacttggattatcatttcggaaagaagactaa
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