Fructilactobacillus hinvesii: M3M39_03245
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Entry
M3M39_03245 CDS
T08844
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fhin
Fructilactobacillus hinvesii
Brite
KEGG Orthology (KO) [BR:
fhin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fhin03009
]
M3M39_03245 (rlmD)
Enzymes [BR:
fhin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
M3M39_03245 (rlmD)
Ribosome biogenesis [BR:
fhin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M3M39_03245 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
PrmA
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
N6_N4_Mtase
Methyltransf_12
TPMT
Methyltransf_23
Methyltransf_32
UPF0020
TRM
CMAS
DOT1
Motif
Other DBs
NCBI-ProteinID:
USS88504
LinkDB
All DBs
Position
670588..671967
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AA seq
459 aa
AA seq
DB search
MSKNKQAPVTKNETLDVDVTDLTYEGMGVAKVDGGYPLFIEDALPGEQVTAKVIKVKKNF
AFAKLLKVNQSSPDRVAIVNKKLTQSGIAPLQHLSYDKQLEFKQHQIAELFQKAHLDQVQ
VAPTIGMEHPVQYRNKAQIPVRELHGQLETGFYRRHSHDLIPIEDFYIQDPAIDDAIVKV
RDVLREFQLPAYNETTHQGLIRNIMVRYGKYSHELMVVLVINDRHLPRAAEITEAIESAL
PNLDSLVVNVNQSTGNRLLGDKSMVLAGKDYIMDQLLGTKFLISPLSFYQVNPVQTEKLY
SLAIEKAQLTKDDIVIDAYCGIGTISLAMAPQGKHVYGVDVVKEAIQDARTNAKLNHIEN
ATFVTGKAEDQMQKWEVEGIKPNVIVVDPPRKGLDASFIESALKMRPERLVYVSCNPATL
VRDAQLLLDGGYTIDQPVQPVDQFPQTPHVESVTVFTKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaataaacaagcaccagtaacgaaaaacgaaacgctcgacgtggacgtgacc
gacctaacttacgaaggaatgggtgtggccaaggttgacggtggttatccgctgttcatt
gaagatgcgctaccgggcgaacaggttacagcaaaggtgattaaggtgaagaagaacttt
gcctttgccaagttgctgaaggttaaccaatctagtccggaccgggtcgccatcgtgaac
aaaaagctaacgcaatcgggaattgctccgttgcaacacctgagttacgacaagcaactg
gagtttaagcaacaccagattgccgaattgttccaaaaggcccacctggatcaggtccag
gtagcgcccacgattgggatggagcatccggtccagtatcgtaacaaggcccagattccg
gtccgggaactgcacggacaactggaaactggattttaccggcggcatagtcatgatttg
attccaattgaagacttctacattcaagatccagcgattgatgatgcgattgtgaaggtt
cgggacgtgttacgagaatttcagcttccggcctacaacgaaaccacgcaccagggactg
attcgcaacatcatggtgcgctacgggaagtacagccacgaactgatggtggtgctggtg
attaacgaccggcatttaccacgggcagcagaaattacggaagcaattgaatcagcgttg
cccaacttggatagcctcgtggttaacgtgaaccagagtacggggaaccggttactgggg
gataaaagcatggtgctggccggcaaagactacatcatggaccaactgttaggcacgaag
ttcttaatttcaccactgtcgttttaccaggttaacccggtgcagacggaaaaactgtac
tcgttagcaattgaaaaggcccagttgactaaggatgacatcgtgatcgatgcctactgt
ggaattggaacaatttcactggcaatggcgccgcaaggtaagcacgtttacggagtcgac
gtggtcaaggaagcgattcaggacgcgcggacgaacgccaagttgaaccacattgaaaac
gcaacttttgtcactgggaaggccgaagaccagatgcagaagtgggaagtggaaggaatt
aaaccaaacgtaattgtggtggatccgccccgtaaaggtcttgatgccagcttcattgag
agtgccttgaagatgaggccagaacgactggtgtacgtttcctgtaatccagccacactg
gtgcgggacgcgcaactgttgcttgatggtggttacacgattgatcagccggtgcaaccg
gtggaccagttcccgcagacgccacatgtggaaagtgtgacggtgtttactaaaaaatag
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