Fructilactobacillus hinvesii: M3M39_04370
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Entry
M3M39_04370 CDS
T08844
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fhin
Fructilactobacillus hinvesii
Brite
KEGG Orthology (KO) [BR:
fhin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fhin03016
]
M3M39_04370 (truB)
Enzymes [BR:
fhin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M3M39_04370 (truB)
Transfer RNA biogenesis [BR:
fhin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M3M39_04370 (truB)
Prokaryotic type
M3M39_04370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
OLF
Motif
Other DBs
NCBI-ProteinID:
USS87362
UniProt:
A0ABY5BSD4
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All DBs
Position
876344..877255
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AA seq
303 aa
AA seq
DB search
MINGIIPLYKPLGMTSFSCVSKMRGIVHQKKVGHSGTLDPNVDGVLPICLGSGTKVVDYL
MATGKTYRGAITLGFATTTEDLDGEIVAEQHDFTPLTMEQIKAGLTHFVGSITQIPPMYS
AVKVNGRRLYDYARHGETVERPRRVVKITDFYPIGAPVIDKEAGTQTIFFEVHCSKGTYV
RTLAVDFGRYFGLPAVMSQLTRIASGGFDIQQTVSFAELEAAQAAGTLEQLVYPIDHALH
GFTHVDLTVDQWERVQHGAFLSATDLQATEAEIVLRYNGSDKALYCYDNQHQLYKPQKMF
SLE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggaattattccgctgtataaacccttgggcatgaccagcttcagttgtgtc
agtaagatgcgtggaattgtgcaccaaaaaaaggtcggtcacagtgggaccctggatcct
aacgttgacggagtcctacccatttgtttgggcagcgggaccaaggtggttgattatttg
atggcaactggaaaaacctatcggggcgcgattactttgggattcgcgaccacgacagaa
gacttagatggagaaattgttgccgaacaacatgatttcaccccattaaccatggagcag
attaaagccgggttaacccactttgttggctccattacccagattccaccaatgtattcg
gcggtcaaggtgaatggacggcgtttgtatgattatgctcgccacggtgaaacggtcgaa
agaccgcgacgggtcgttaagattaccgatttttatccaattggagctcccgtgattgat
aaggaggcggggactcaaaccatcttctttgaagttcactgtagcaaagggacttatgtt
cggacgctagcggtggattttggtcgctattttgggttaccagcggtgatgtcacagtta
actcgtattgcgagtggtggttttgacatccaacaaacggtttcatttgctgaattagaa
gcggcccaagcagctggaacgttagaacagttagtctatccaattgatcatgctctacat
ggttttacgcacgttgatttaacggtcgaccaatgggaacgagttcaacacggagcgttt
ttatctgcaacggatctgcaagccactgaagctgaaattgttttacgctataatggtagc
gataaggctttatattgctatgacaatcagcaccagttgtataagccacaaaaaatgttt
agtttggagtaa
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