Fructilactobacillus hinvesii: M3M39_06040
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Entry
M3M39_06040 CDS
T08844
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fhin
Fructilactobacillus hinvesii
Brite
KEGG Orthology (KO) [BR:
fhin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhin03019
]
M3M39_06040
03009 Ribosome biogenesis [BR:
fhin03009
]
M3M39_06040
Enzymes [BR:
fhin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M3M39_06040
Messenger RNA biogenesis [BR:
fhin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3M39_06040
Ribosome biogenesis [BR:
fhin03009
]
Prokaryotic type
rRNA helicases
M3M39_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
CMS1
Motif
Other DBs
NCBI-ProteinID:
USS87668
LinkDB
All DBs
Position
complement(1171610..1172971)
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AA seq
453 aa
AA seq
DB search
MSASFTDYHFQPFIMEAIQALGFRRPTPIQAQVIPTIQHGKSIVGKSATGSGKTHAFLLP
LFDQLDPKNQQPQVVITTPSRELAYQIYENIKQLAQFSPDVIHVENYVGGTDKERQLEKL
EREQPQVVVGTPGRILDIVKSGKLEINAAHRLVIDEADMTLDLGFLAEVDQIAARMAKDL
QMMVFSATIPPKLKPFLQKYLKNPVITDIPTEHVINADVSNWLISTKGQDKNRLIFQLLT
MGNPYLALVFANTRERADELDKYLQGQGLKVAKLHGGMQPRVRKRVMKQIQNLDFQYVVA
TDLAARGIDITGVSLVINDDLPADSEYFVHRVGRTGRNGMPGTAITLYGPDDEAKIAELE
AKGVQFQPKEIKHGEVVDTYDRRRRQQYRGHHDRLDGSTLGMIKKKKKNVKPGYKKKIKR
AIKIKDQQNRKVELRQQIRAKKKQKKRSSQRYQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctcatttacagactatcattttcaaccatttatcatggaagccattcaagcc
ttgggatttcggcggccaacgccgattcaggcgcaggtgattcctacgattcaacatgga
aagagtatcgtgggaaagtcagcaaccggaagtgggaagactcacgccttcttactacca
ttgtttgatcaactggatcctaaaaaccagcaaccgcaagtggtgattacaacaccaagt
cgggaattggcataccagatttacgaaaacattaaacaactagcccagtttagtcccgat
gtaattcacgtggaaaattacgtgggaggaacggacaaagaacggcagcttgaaaaactg
gaacgggaacagccccaagtggtagtggggacccccgggcggattctagatatcgttaag
agtggtaaattagagattaacgctgctcaccgactcgtaattgatgaagctgacatgacc
ttagatttgggctttttagcagaagtcgaccaaattgcagctcgaatggcaaaagacctg
cagatgatggttttctcagctaccatcccacccaaattaaaaccattcttgcaaaagtac
ctaaaaaatccggtcattacggacattcctactgaacacgtaattaatgccgatgtttca
aactggttaatttcaactaaaggacaggataagaatcgccttattttccaactgttaacc
atgggaaatccctatttagctctggtttttgccaatactagagaacgagctgatgaactt
gataagtacttgcaaggacaaggattaaaggtggccaaacttcatggcgggatgcagcct
cgagttagaaaacgggtaatgaaacaaattcaaaacctggacttccagtacgtggtggct
accgacctggcggctcggggaattgatattactggagtttcgttagtgattaatgatgat
ttaccggctgattcagaatactttgtgcatcgggtcggacgaactggccgaaacggaatg
cctggtacggcaattaccctttatggtccggacgacgaagccaaaattgcggaattagag
gcaaagggagtgcagtttcaaccaaaagaaatcaagcacggtgaagtggttgatacgtat
gatcggcgtcgtcgacagcaatatcggggacatcatgaccgcttggatggttccacttta
ggaatgattaagaaaaagaagaaaaacgttaaacccggctataagaagaaaatcaaacgg
gccattaaaattaaggaccagcagaaccgcaaggtggaactgcgacaacagattcgcgct
aaaaagaagcagaaaaagcgcagttcgcaacgatatcaataa
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