Fervidibacillus halotolerans: OE105_02595
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Entry
OE105_02595 CDS
T08855
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fhl
Fervidibacillus halotolerans
Brite
KEGG Orthology (KO) [BR:
fhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhl03400
]
OE105_02595 (addA)
Enzymes [BR:
fhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OE105_02595 (addA)
DNA repair and recombination proteins [BR:
fhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OE105_02595 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAA13035
UniProt:
A0A9E8RXS1
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All DBs
Position
555455..559222
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AA seq
1255 aa
AA seq
DB search
MSIPVKPKNVTWTTDQWRAIYESRRDILVAAAAGSGKTAVLVERIIQKIIDEKHPVDVDE
LLVATFTNASAAEMRHRIGQAIEKEIERNPNSHHLRKQLQLLNNASISTLHSFCLNVVRK
YYYMIDIDPGFRIADQTEMLLVRDEVVETMLEEEYGKQNQDFFQLVDLFTNDRSDVILQD
LILKLYDFSRSNPYPNEWLEKIVGMYDTSTVDQVDDLPFIEPLLIDIELNLREANRLFHE
GLELTKLPGGPHPRAENFLADIELTEALISAKNESFETLFHAMQQVKFSTLKRCSGDEFD
QELVTKSTNLRNKGKKIIQHLKETFFSRKPSTFLQDLQEMKQPVRTLVRLVRDFSAKFEQ
VKREKGIVDFSDLEHYALQILGKRKSKNTALEPTEAALHFRQRFKEVLIDEYQDTNMVQE
TILQLVKKPTEENGNLFMVGDVKQSIYRFRLAEPNLFLQKYLRFFSKKEGGGLRIDLAKN
FRSRKEILDGTNFLFKQIMDKKIGEIDYDERAELKKGAPYPEDEPHPIELVIISKEGEEE
EPATHSIEETDEFAKEELEQSEMESRFVARKIRELIDSKKQIFDPKTKTYRPIRYRDIVI
LFRSFVWAPQFMEELKDYGIPAYADMSTGYFEAAEVSTMLALLQIIDNPYQDIPLAAVFR
SPMIGLKEEDLARIRIADRKGTFYEAAKAFVRHPVRDKRDEWIHSKLTSFFKNLSKWRSM
ARQGALSELIWALYRDTNFYDFVGGLPGGKQRQANLRALYDRARQYESTSFRGLFRFLRF
IEKMRKRGSDLGTARALGEQEDVVRLMTIHGSKGLEFPVVFIVGLARKFNFSDLKQNYLL
DKNYGFATNYMNAEKQITYPSLFHMSIARKKRLEQIAEEMRVLYVALTRAKEALYLVASV
KNIDEESEKWQKHLDNPDWLLADYDRMKAEKFLDWIGPALIRHRSGHILRREDEQKEDLT
NREIYNHPSEFIINVMTSEQFERSQEEEKNEDLDFLTLVKKGEPIPVQSSFRKKIEDQLN
WTYPYMEATVFRSKQSVSELKRLKEIRDVESGEDLLPTWKKPITTRPKFMQEKSLSPAEK
GTAMHMVMQHIDLTMKPTESSLKSLLFSMEQKELLTPEEAEAIDISAILSFFETEIGERL
LRAKWVKRELPFSYTLPAREIYSTQIEDSIFIQGIIDCLFQDDQGLILLDYKTDQITRRF
KNGFEGAKPILLNRYKIQMQLYKRAVEGILNKSLAETYLFFFDGAHLLQVNLEQS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgagtattccagtaaaaccaaagaatgtgacgtggacgaccgatcaatggcgggccatt
tatgaaagcagacgtgatattttagtcgcagcagcagccggctcaggaaaaactgctgtt
ttagtagaacggattattcaaaaaattatcgatgaaaaacatcccgttgatgtagatgaa
ttattagtcgcaacgtttacgaatgcatctgctgcagaaatgcgccatcggattggtcaa
gcgatcgaaaaggaaattgaaaggaatccaaattcccatcatttgcgaaaacaactacaa
ttgctgaacaatgcatcaatttccactttacattccttttgtttaaatgtggtacggaaa
tattattacatgattgatatcgatcccggttttcgtatcgccgatcaaacagaaatgcta
ttagtgcgcgatgaagttgtggaaacgatgttggaggaggagtatggcaaacaaaatcaa
gattttttccaattggttgatttatttacaaacgatcgaagcgatgtgattttgcaagat
ttaattttaaaattgtacgatttttcccggtcgaatccatatccaaatgaatggcttgaa
aagattgtgggaatgtatgacacgtcgaccgttgatcaagtggatgatttacctttcatc
gagccactattgatcgatattgaactcaatttaagagaagcgaatcgtctgttccatgaa
ggtcttgaattgacgaagttgcctggaggtcctcacccccgtgcggaaaattttttagcg
gatatcgaactaactgaagcacttatttctgcaaaaaatgaatcctttgaaacgttattc
catgctatgcaacaagtgaaattttcaaccttaaaacgatgttctggagatgagtttgat
caagaattagtaaccaaatctacaaatcttcgaaataaagggaaaaaaataatccaacat
ttaaaggagacatttttttcccgtaaaccgtccacctttttacaagatttacaggaaatg
aaacaaccggttcgtacattagtccgactcgtacgtgacttcagtgcgaaattcgaacag
gtgaaaagggaaaaaggaatcgtagacttttcagatttggaacattacgccttacaaata
ttaggcaaaaggaaatcgaaaaacacggcattggaaccgacggaagcggcactccatttt
cgccaacggtttaaagaagtgttaatcgatgaataccaagatacgaatatggtccaggaa
acgattttacaattggtgaaaaagccgaccgaagaaaatggaaatttattcatggtcgga
gatgtaaaacaatcgatttaccgattccgccttgcagagcccaatctatttttacaaaaa
tatttgcgcttttttagcaagaaagaaggtggaggactacggatcgacttggcaaaaaat
ttccggagtcggaaagaaattttagacggaacaaattttttgttcaagcaaataatggac
aaaaaaattggagaaatcgactatgatgaaagggcggaattgaaaaaaggtgcaccttat
ccagaggatgaacctcatcctatcgagcttgtaattatctcgaaggaaggggaagaagaa
gagcccgctactcattcaattgaagaaacggatgaatttgcaaaagaggaattggaacag
tcggaaatggaatcccgttttgtagccagaaaaattcgtgaacttatcgattcaaaaaaa
caaattttcgatccgaagacgaaaacgtatcgtccgattcgctatcgggatatcgtcatt
ttatttcgttcctttgtatgggccccccaatttatggaagaattaaaggattatggaata
ccggcgtacgcagatatgtcaacggggtattttgaagctgcggaagtatctaccatgttg
gctcttttgcaaatcatcgacaatccgtaccaagatattcctttagctgctgtatttcgt
tctccgatgatcggattgaaggaagaggatttggctcgcattaggatagcggatcgtaaa
ggaacattttatgaggcggcgaaggcttttgtacgtcatcctgtacgggataaaagggat
gaatggatccatagtaaactaacttcctttttcaaaaatctaagtaaatggcgttccatg
gcaaggcaaggagctctttcagaattaatatgggcgttgtatcgggatacaaatttttac
gatttcgtcggaggacttcccggaggaaaacagcgacaagcgaatttacgagccttatat
gatcgagcgagacaatatgaatcaacatctttccgggggctgttccgtttcttacgcttt
atcgaaaagatgcgaaaaagagggagcgatctcggtaccgcacgagcattaggggagcag
gaagatgtcgttcgtttaatgacgattcatggaagtaaaggattagaatttcccgtcgtc
ttcatcgtcggcctggcgaggaagtttaacttttcggatttaaaacaaaattatttatta
gataagaattacggttttgccacaaattatatgaatgcggaaaaacaaatcacttatcct
tccctgttccatatgtcgatcgcaaggaaaaaacggttggaacaaatcgcagaagaaatg
cgcgttttatatgttgctttaacaagggcgaaggaagcattatatttagttgcgtccgtt
aaaaatatcgatgaggaatcggaaaagtggcaaaaacatttagacaatcccgattggctt
ttggccgattacgatcggatgaaagcggaaaaatttttagattggattggtccagcgcta
attagacatcggtctggccacatattaagacgtgaagacgagcaaaaggaggatttaacc
aatcgggaaatttacaatcatccatcggagtttatcatcaatgtaatgacgagtgaacag
tttgaaagaagccaggaggaggaaaaaaacgaagatctcgatttcttaacattagttaaa
aagggggagccgattccagtacaatcatcttttcgaaaaaaaattgaagatcaattaaat
tggacatatccatatatggaggcgactgtatttcgtagtaagcaatccgtttctgaactt
aaaaggttaaaagaaattcgtgatgtggaaagtggcgaagatctattaccgacttggaaa
aaaccgattacaacccgtccaaaatttatgcaagaaaaatcactgagtccagcggaaaag
ggaacggccatgcatatggtcatgcaacatatcgatttaacgatgaaaccgacagaaagc
tccctcaaatcgctccttttttccatggaacaaaaggaattattaacaccggaggaagca
gaagcgatcgatatttccgccatactatctttttttgaaacggagataggagagcgattg
ttgcgagcaaaatgggtgaaacgggaactcccctttagctatacgcttcccgctcgtgaa
atttattcgacacagattgaggattcaatttttatccaaggaattatcgattgcctgttt
caagatgatcaaggtttgattcttttagattacaaaaccgatcaaattaccagacgattt
aaaaacggttttgagggagcaaaaccgatcttattaaaccgatataaaattcaaatgcag
ttgtataagcgggcagtggaagggattttgaacaaatcgttggccgaaacgtatttattt
ttcttcgatggcgcccatcttttacaggtaaatctggaacaatcataa
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