Fervidibacillus halotolerans: OE105_05310
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Entry
OE105_05310 CDS
T08855
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fhl
Fervidibacillus halotolerans
Pathway
fhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OE105_05310 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhl03019
]
OE105_05310 (rny)
Messenger RNA biogenesis [BR:
fhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OE105_05310 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
WAA13528
UniProt:
A0A9E8M101
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Position
complement(1131414..1132976)
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AA seq
520 aa
AA seq
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MMGLNEIIISILLFPVGFIAGYFIRKSIAEAKITGAKDAAEKILDDAKREAESLKKEALL
EAKDEIHKLRTETERELRERRSELQKQENRLLQKEENLDRKDETLDKREILLEKKEDSLN
QRQQHIEQMESKVEEMVRIQQSELERISGLTRDQAKTIILERVEKELSHEIAFKVKEAEN
RIKEEADKKAKNILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTIETLT
GIDLIIDDTPEAVILSGFDPIRRETARLALEKLVLDGRIHPARIEEMVEKARREVDEHIR
EIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSIEVAHLSGLMAAELGEDEML
ARRAGLLHDIGKAVDHEIEGSHVEIGVELATKYKEHPVVIDSIASHHGDQEPNSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVKPDMID
DLESHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatgggattaaatgaaatcatcatctccattttgctgttccccgtcggttttattgct
gggtatttcattcgaaaatccattgctgaagcgaaaataacaggagcgaaagatgccgct
gaaaaaatattagatgatgcaaaacgagaagcggaatcattaaagaaagaagccctgtta
gaagcaaaggatgaaattcacaaacttcgaacagaaacggaacgtgaactccgagaacgg
agaagcgaactgcaaaaacaagaaaaccgtttgttgcaaaaagaggagaatcttgatcgt
aaagatgaaacgttagataaacgtgaaattttattagaaaaaaaggaggattctctaaac
caaagacaacagcatattgaacagatggaaagcaaagtggaagagatggtacgtattcaa
caatcggaattagaacgaatttccggattgacaagggatcaagcgaaaaccatcattctt
gaacgggtggaaaaagaactttcccacgaaatcgcctttaaggtgaaagaagcggaaaat
cgtataaaagaagaagcggataaaaaggcgaaaaatattctttcccttgccatccaacgt
tgtgctgccgatcatgtagctgaaacaaccgtctctgtcgttaacttgccgaacgatgaa
atgaaagggcgaatcatcggaagagaaggaagaaatattcgtacgattgagacattaacc
ggtattgatttgatcatcgatgacacaccggaagcggtaattttatccggattcgacccg
attcgaagagaaacggcaagacttgctttagaaaaactcgttctcgacggtcggattcat
ccggcaaggatcgaagaaatggtggaaaaggcaaggcgagaagtcgacgaacatatccgc
gagatcggcgaacagacaacctttgaggtaggggttcacggcttacatccggatttaatt
aaaattctcggtcgactgaaattccgtacaagttacgggcaaaatgttttgaaacattcc
atcgaagtcgctcacctatccggattgatggctgctgaactcggtgaagatgaaatgctc
gcaagaagggctggattgcttcatgatattggaaaggctgtagaccatgaaattgaaggt
agccacgtagaaattggcgtggaattagccacaaagtataaagaacatccggttgtaatc
gacagtattgcttcccatcatggtgatcaggaaccgaactcgatcattgcagtcctcgtc
gctgcagcagatgcgttgtctgccgcaagaccaggggcaagaagtgaaacattagaaaac
tatatccgtcgtttggaaaaactcgaagaaatttcggaatcctatgacggtgtggaaaaa
tcctatgctattcaagcgggtagagaagtgcgtattatcgttaaacccgatatgatcgac
gatttggaatctcaccgtttagctcgggatatacggaaacggatcgaggaagaattggat
taccctggtcatattaaagtgacggtcattcgtgaaactcgagcagttgaatatgcaaaa
taa
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