Fervidibacillus halotolerans: OE105_05790
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Entry
OE105_05790 CDS
T08855
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fhl
Fervidibacillus halotolerans
Brite
KEGG Orthology (KO) [BR:
fhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fhl03032
]
OE105_05790 (topA)
03400 DNA repair and recombination proteins [BR:
fhl03400
]
OE105_05790 (topA)
Enzymes [BR:
fhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OE105_05790 (topA)
DNA replication proteins [BR:
fhl03032
]
Prokaryotic type
DNA Topoisomerases
OE105_05790 (topA)
DNA repair and recombination proteins [BR:
fhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OE105_05790 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WAA13612
UniProt:
A0A9E8M256
LinkDB
All DBs
Position
complement(1230074..1232146)
Genome browser
AA seq
690 aa
AA seq
DB search
MSAEYLVIVESPAKAKTIEKYLGKKYKVKASMGHVRDLPKSQIGVDVDNGFQPKYITIRG
KGPVIKELKNAAKKAKKVYLAADPDREGEAIAWHLANSLELDTMSDCRVVFNEITKDAIK
ESFKKPRSINMDLVNAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVAVKLIIDRE
NEINQFVPEEYWKITGHFAINGETFEAHFYGKDGKKISLKSEQDVQNILQKIKGEFFSVK
KVVKKERKRQPSPPFITSSLQQEAARKLNFRAKKTMMVAQQLYEGIDLGKEGTVGLITYM
RTDSIRVSDVAKREATQFIETEYGKEYVKEKERKEKTGDNVQDAHEAIRPTSVFRTPNSV
KQYLSRDQYRLYKLIWERFVASQMASAIMDTMTVDLENNSIIFRANGSKLKFPGFMKVYV
ESSDDLDEQENDFLPDLKESDEVKNIEMKPTQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPILDTIQRRGYVTLDKKRFVPTELGRIVIELISEFFPEIIDVEFTAKMESDLDLIEEG
KENWINILDHFYNGFKKNLEKAEIEMEKVEIEDEYAGQDCEKCGHPMVIKMGRFGKFMAC
SNFPECRNTKPIVKEIGVTCPKCKKGQVIERKSKNKRVFYGCNRYPECDFLSWDKPVNRP
CPKCSGMLVEKKIKKGVQIQCSQCDYKEEL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagaatatttagtgatcgtggaatcgccggcaaaggcgaaaacaattgaaaaa
tatttaggaaaaaaatataaggtaaaggcatccatgggtcatgtccgtgatttaccgaaa
agtcaaatcggagtggatgtggataacggtttccaaccgaaatatattacgattcgagga
aagggtccggttataaaagaattaaaaaatgccgcaaaaaaagcgaaaaaagtttattta
gctgccgacccggaccgagaaggggaagcgattgcttggcatttagccaattccctagag
ctagatacaatgagcgattgtcgagtcgtttttaatgaaataacgaaggatgcgattaaa
gaatcctttaaaaaaccaagatcaatcaatatggatttagtaaatgcccagcaagcgagg
cgaatacttgatcgacttgtcggttataagatcagccccattttatggaaaaaagtgaaa
aagggattaagtgccgggcgagttcaatcggtagcggttaaattaatcatcgaccgagaa
aatgaaattaatcaatttgttccagaggaatattggaaaataactggtcatttcgcaata
aatggagaaacgtttgaagcccatttttatggaaaagacgggaaaaagatatccttaaaa
tcggaacaggacgttcaaaacattctccaaaaaataaaaggggaatttttctctgttaaa
aaagtcgtaaaaaaagaacgaaaacgacaaccttctcccccttttattacttcttcgttg
caacaagaagccgctcgaaaattaaatttccgagcgaaaaaaacgatgatggtcgcccag
caactttatgaaggtatcgacttgggaaaagaagggacagttggtctgatcacttatatg
cgaacggattccatacgcgtctcggatgtagcaaaacgggaggcaacccagtttatcgaa
acggaatacgggaaagaatatgtgaaggaaaaggagagaaaggaaaaaacaggggacaat
gttcaagatgcccatgaagcgatccgaccgacaagtgtgtttcggacaccgaattccgtt
aaacaatatttatcgagggatcaataccgattgtataaattaatttgggaacggtttgtg
gcaagtcaaatggcttcggcaataatggatacgatgactgttgatttagaaaacaactcg
attatatttcgagcgaacggttcaaaactaaaatttccaggatttatgaaagtatatgtg
gaaagttcggatgatttagatgaacaggaaaacgactttctccccgatttaaaagaatca
gatgaagtaaaaaacatagaaatgaaaccgacccaacatttcacccaaccacctccaaga
tatacggaggcaaggctcgttaaaacattagaagaattggggatcggtcgtccttctaca
tatgcaccgatcctcgatacgattcaaaggcgtggttacgtaacgttagataaaaagcgg
tttgttccgacagaattaggaagaattgtcatcgaattaatttccgaattttttcccgaa
atcatcgatgttgaattcactgcaaaaatggaatcggatttggatttgattgaagaagga
aaggaaaattggattaatattttggaccatttctataacgggtttaagaaaaacttagaa
aaagcagagattgaaatggagaaggtagaaattgaagatgaatacgcaggccaagattgt
gagaaatgcggacacccgatggtgatcaagatgggtcgtttcggtaaatttatggcttgt
agcaattttcccgaatgtagaaacacaaagccaatcgtgaaagaaatcggtgttacatgt
ccaaaatgtaaaaagggtcaagtgatcgaaagaaaaagtaagaacaagcgggttttttac
ggttgcaatcgttatcctgaatgtgattttctttcctgggataaaccggtcaatcgtcct
tgtccaaaatgtagtggaatgttagtggagaaaaaaataaaaaaaggcgtacaaatacag
tgtagtcaatgtgattataaagaggaactataa
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