Fervidibacillus halotolerans: OE105_07495
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Entry
OE105_07495 CDS
T08855
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fhl
Fervidibacillus halotolerans
Brite
KEGG Orthology (KO) [BR:
fhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhl03019
]
OE105_07495
03009 Ribosome biogenesis [BR:
fhl03009
]
OE105_07495
Enzymes [BR:
fhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OE105_07495
Messenger RNA biogenesis [BR:
fhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OE105_07495
Ribosome biogenesis [BR:
fhl03009
]
Prokaryotic type
rRNA helicases
OE105_07495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
RRM_fung
Motif
Other DBs
NCBI-ProteinID:
WAA11479
UniProt:
A0A9E8LXQ6
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All DBs
Position
complement(1561440..1562741)
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AA seq
433 aa
AA seq
DB search
MKKNPFEKFQLKSYLLDALERKEFVRPTEVQERVIPKVLAGKSVIGQSQTGTGKTHAFLL
PILSKIDESVQEVQGVITAPTRELARQIYLMARELVEYDGTSKVSIRLFVGGTDKNRYIE
GLKKQPQLVIGTPGRIIDLVKEEALSIHTARYLVVDEADLMLDLGFLDMVDQIAVRMPKD
LQMLVFSATIPKHLEPFLKKYMEQPEYVQVDPKTKTPKKIHHSLLPLRHRDKTELLFQLL
KVYNPFLAIVFANTKKMVDELADELAIKGLKVGVIHGDLTPRERKKMMNQIHDLKYQYII
ATDLAARGIDIDGVSHVIHYELPSDLQFYIHRSGRTGRGQYEGISTVLFETKDEQKITKL
EKMGIYFDTIDINDGEIVHIQHRNKRSKRTKPTEKTNTKGIKPPKKVKPGYKKKLREQME
KLNRKQKRKGKLN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatccatttgaaaaatttcaattaaaatcctatctattggatgcccttgaa
agaaaagaatttgtacgaccaactgaagtacaagaaagggtaattccaaaggttttggct
gggaaaagcgtcatcggccaatcccaaacggggaccggtaaaacccatgcttttttactt
cctatactttcaaaaatagatgaatcggttcaagaagttcaaggagtaattaccgctcca
actcgcgaattggcgaggcaaatttatctgatggctcgagaattggtagaatacgacgga
acatcgaaagtttccatccggttattcgtcggtggaacggataaaaatcggtatatcgaa
ggattgaaaaaacaaccccaactagtaatcggtacccctggtcgaatcattgatttagta
aaagaagaagctttatctatacatacggcccgttacctcgtcgtcgatgaagccgattta
atgcttgatcttggatttttagatatggttgaccaaattgcagtgaggatgcctaaggat
ttacaaatgcttgtcttttctgcaacgattccgaaacatttggaaccatttttgaaaaaa
tatatggaacaaccggaatatgttcaagtagacccaaaaacaaagacaccgaaaaaaatc
caccattctttgttacccctccgtcatcgggacaaaacagaactgctattccagttactt
aaggtatataatccttttttggctatcgtttttgccaatacgaaaaagatggtagatgaa
ttggcagatgaattggctataaaggggttgaaagtaggggttatacatggggatttaacc
ccacgggaacgaaagaaaatgatgaatcaaattcatgatttgaaataccagtatattatt
gcgacggatttagctgccagaggcattgatattgatggggtgagtcacgtaatccattat
gaacttccttcagatcttcaattttatattcatcgttccggtcggacaggacggggacag
tatgagggtatttctacggtgctttttgaaacgaaggatgaacaaaaaataacaaaatta
gaaaaaatggggatttatttcgatacaatcgatataaacgatggagaaatcgttcacatt
caacatcgaaataaacggagtaaacgaacaaagccgacggaaaaaacgaatacgaagggg
ataaaacctccaaaaaaagtaaaaccaggctacaaaaagaaattaagggaacagatggag
aaattaaaccggaaacagaaacggaaaggaaaattgaattga
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