Fervidibacillus halotolerans: OE105_13720
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Entry
OE105_13720 CDS
T08855
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fhl
Fervidibacillus halotolerans
Pathway
fhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OE105_13720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhl03019
]
OE105_13720
03009 Ribosome biogenesis [BR:
fhl03009
]
OE105_13720
Enzymes [BR:
fhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OE105_13720
Messenger RNA biogenesis [BR:
fhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OE105_13720
Ribosome biogenesis [BR:
fhl03009
]
Prokaryotic type
rRNA helicases
OE105_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
AAA_30
SRP9-21
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WAA12556
UniProt:
A0A9E8RY75
LinkDB
All DBs
Position
2911117..2912595
Genome browser
AA seq
492 aa
AA seq
DB search
MMLSFGEFFSRRSLKKLVKFEELHLSASTLKSLKRIGFEETTPIQEQTIPLGLAGRDIIG
QAQTGTGKTAAFGIPLIEKVNTKKKHIQCLVIAPTRELAIQVSEELHKIGYDKHVHVLAV
FGGQDISRQIRALKKMPSIIVGTPGRLLDHINRGTIKLSNIHTVVLDEADEMLNMGFIDD
IEAILEKIPEKRQTLLFSATMPEKIRQIAIKFMHNPETVKTKSREMTVPQIEQYFVKVDE
REKFDALTRLLDYQSPDLAIVFGRTKRRVDELSEALSIRGYTAEGIHGDLSQAKRLSVLR
KFKEGSIDVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAITFV
VPREMGYLRVVEETTKKRMKRMQVPSLAEAIEGQQRIIIDKIINTIEENDLTLYRKAAEQ
LLQEQDSISIVSAALKLLTKEPDNTPVKISYEVPLPVKRDKMTKSGGKKEPQKRRGRRVN
KFTGRSNNKAKS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctcattcggagagttttttagtagaaggagtttgaaaaaattggtaaaattt
gaggaattacatttaagtgcaagtacattgaagtcattaaaacgaatcggttttgaggaa
acgacgccgattcaagaacaaacgattcccctaggtctggcgggtcgagatattatcggt
caggcgcaaacgggaacaggaaaaacggcagcttttggtattccgctcattgaaaaggta
aatacgaaaaaaaaacatattcaatgtttggttatcgctcctacacgggaattagcgatt
caagtttccgaggaattgcataaaatcggttacgataaacatgtccatgtattggctgtg
tttggtggtcaagatatttctagacaaattcgggctttgaaaaaaatgccgagcatcatc
gtcggaacacctggaagattacttgatcatatcaaccgaggtacgattaagttgtcaaat
attcataccgttgttttagatgaagcggatgaaatgttaaatatgggttttattgatgat
atagaggcgattttagagaagataccggaaaaaagacaaaccctattattttctgcaacg
atgccagagaaaattcgacaaatcgccataaaatttatgcataatcctgaaacggtcaag
acgaaatcgagggaaatgaccgttccccaaattgaacaatattttgtcaaagtagatgag
agggaaaaattcgatgctttaactcgtcttctcgattaccaatcaccggatttggccatc
gtgttcggtcgtacgaaacgacgggtagatgaattgtctgaggcactgtccattcgtggt
tatacagcggaaggcatccatggagatttgagccaagcgaaaagattatcggttttacga
aaatttaaagagggaagcattgatgttcttgtcgcaacggatgtagctgcaaggggatta
gatatttctggcgttactcacgtgtataatttcgacatcccccaagacccggaaagttat
gttcaccgaatcggtcgaacaggaagggctggtaaaacgggaatggccattaccttcgtc
gtaccgagggaaatgggatatttaagggtcgtagaagaaacgacgaaaaaacgaatgaaa
cgaatgcaagtcccgtctttagcagaagcgattgagggccagcaacggattattattgat
aaaattatcaatacgattgaggaaaatgatttaaccctttatcgaaaagcagctgaacaa
ttgttacaggaacaagatagcatatccattgtttctgcagctttaaaacttttaacaaag
gaaccggataatacgccggttaaaatctcatatgaagttccactaccagtgaaacgggat
aaaatgacaaaaagtggcggaaaaaaagaaccccaaaaaagaagggggcggagggtgaat
aaatttaccgggagatcgaataacaaggcgaaatcataa
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