Facklamia hominis: R0V13_00555
Help
Entry
R0V13_00555 CDS
T09549
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fhm
Facklamia hominis
Pathway
fhm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0V13_00555 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhm03019
]
R0V13_00555 (groL)
03110 Chaperones and folding catalysts [BR:
fhm03110
]
R0V13_00555 (groL)
03029 Mitochondrial biogenesis [BR:
fhm03029
]
R0V13_00555 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fhm04147
]
R0V13_00555 (groL)
Enzymes [BR:
fhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R0V13_00555 (groL)
Messenger RNA biogenesis [BR:
fhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R0V13_00555 (groL)
Chaperones and folding catalysts [BR:
fhm03110
]
Heat shock proteins
HSP60 / Chaperonin
R0V13_00555 (groL)
Mitochondrial biogenesis [BR:
fhm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R0V13_00555 (groL)
Exosome [BR:
fhm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R0V13_00555 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R0V13_00555 (groL)
Exosomal proteins of breast cancer cells
R0V13_00555 (groL)
Exosomal proteins of colorectal cancer cells
R0V13_00555 (groL)
Exosomal proteins of bladder cancer cells
R0V13_00555 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DUF4142
REF
Motif
Other DBs
NCBI-ProteinID:
WPJ90927
LinkDB
All DBs
Position
105469..107085
Genome browser
AA seq
538 aa
AA seq
DB search
MAKELKFSEDARAALLRGVDILANTVKTTIGPKGRNVVLDKTYGSPLITNDGVTIAKEIE
LEDRYENMGAQLVQEVASKTNDIAGDGTTTATVLTQAIAREGMKNVTAGANPIGIRRGID
KATQTAVKALKELSQPVSSKESIAQVAAVSSGEVRIGELIADAMEKVGNDGVITIEDSQT
IDTELSVVEGMQFDRGYLSQYMVTDNEKMVAELENPYVFITDRKISNIQDILPLLESIMQ
SGRPLLMIAEDVEGEALPTLVLNKLRGTLNVVAVKAPGFGDRRKAMLEDIAVLTGATVIS
EELGFELKDATVDHLGKTAKVTVTKDNTTIVQGGGDSDKIQERVKLLRKQLEETTSSYDK
EKLQERIAKLAGGVAVIKVGAATETAQKEIKLRIEDALNATRAAVEEGIVPGGGTAYLTI
KQEVEATETETDDEATGVKIVARALEEPIRQIAQNAGKEGSVVVNEVLNAKKGTGYNAAT
DKYEDMIQAGIVDPTKVTRSALQNATSVAALLLTTEAIVAEIPKDTPEAAGPQMGGMM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaattaaaattttcagaagatgcacgtgcagccttacttcgaggcgtggat
attttagcaaatacagttaaaacaaccattggtcctaaaggacgaaatgtggttttagat
aagacttatggatctccattaattactaatgatggagtgacgatcgctaaagaaatcgaa
ttagaagatcgttacgaaaatatgggagctcaattggttcaagaagtcgcttcaaaaaca
aacgatatcgcaggtgacggaacgaccacagcgactgtattaactcaagcgattgctcgc
gaaggaatgaagaacgttactgcaggggcaaatccaatcggtatccgccgaggaattgat
aaagcgactcaaacagcggttaaggcgttgaaagaattatcgcaacctgtttcttcgaaa
gaatctattgcacaagtagcagctgtttcatcgggtgaagtgcgtattggtgaattgatt
gcggatgcgatggaaaaagtaggtaatgatggagtcatcactattgaagattcacaaacg
atagacactgaattatctgttgtagaaggtatgcaattcgaccgtggttatctatcacaa
tatatggtaacggataacgaaaaaatggttgcggaattagaaaatccatatgtctttatt
acagatcgtaaaatctcaaatattcaagatatcttgccattgcttgaatcaattatgcaa
tcaggtcgtccactcttaatgattgcagaagatgttgaaggagaagctttacctacattg
gtgttgaacaaattacgtggtactttaaatgtagttgccgtaaaagcacctggattcgga
gatcgccgtaaagcaatgttggaagatattgctgttctaacgggagcaactgttatctct
gaagaattaggctttgaattaaaagatgctacggttgatcatcttggaaagaccgcgaaa
gtgactgttacaaaagataacacaaccattgtccaaggtggtggagattcagataaaatt
caagaacgcgttaaattgttacgtaaacaacttgaagaaaccacttcaagctatgataag
gaaaagcttcaagaacggatcgctaaattagccggtggtgttgcggtgatcaaagtgggt
gctgcaaccgaaactgctcaaaaagaaattaaattaagaattgaagatgctttgaatgca
actcgtgcagcagttgaagaaggaattgttcctggtgggggtacagcatacttaaccatc
aaacaagaagttgaagcaactgaaactgaaaccgatgatgaagcaactggtgtgaaaatt
gttgctcgtgctttagaagagccaattcgtcaaatcgctcaaaatgctggtaaagaagga
tcagtagttgtcaacgaagttctcaacgcaaagaaaggtacaggatacaacgctgctaca
gataagtatgaagatatgattcaagcaggaattgttgatcctactaaagtcactcgttct
gccttacaaaatgctacttcagttgctgctcttctattaacgactgaagcgattgttgca
gaaatccctaaagatactcctgaagcagcaggaccacaaatgggtggcatgatgtaa
DBGET
integrated database retrieval system
