Facklamia hominis: R0V13_01095
Help
Entry
R0V13_01095 CDS
T09549
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fhm
Facklamia hominis
Pathway
fhm02020
Two-component system
fhm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fhm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R0V13_01095
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R0V13_01095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fhm03021
]
R0V13_01095
Transcription machinery [BR:
fhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R0V13_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
DUF5106
Motif
Other DBs
NCBI-ProteinID:
WPJ91018
LinkDB
All DBs
Position
200630..201904
Genome browser
AA seq
424 aa
AA seq
DB search
MSVVDLPLQAIKQSDIFQNDLLLEILDLNGEQLTYYFEDKLIENPFIEFEYPIEHRVNQV
PVDRHGHEADPAMDQQSPWLAQTLETFLYEQTMLHRHTVIRDVMVALIDYIDDQGYLPYT
YEELAAKLHQDPIVVLDAITLLQQLEPAGVAAYNVKECLLLQTLQDKQAPTRAAYLLENF
FDNLNHQDYAAIQATTGLSEAVIQECVYYYHSLRPVPASLFESRPVTGSIPDVKAFIDQD
QVKLEFNHQYYPRLKFNQTYYQEMTEQEDSDLQAYIQKHYQQYQSMEQALKLREQLVLAA
SQLIIDHQKDFFLKVTPTPKPYLMKDLAEQMGLSEALVRLIVMNKNLMFNEVVYSLSDFI
NVSAKVGRSGLSALNIQALIKNIIHEQGSAITDQAVVELLAKDRIMISHHLVKRYRDSMN
NDQP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgtagatttgcctttgcaggcaattaaacaatcagatatcttccagaacgat
ctcctattagaaatactcgatctcaacggagaacaactaacgtattactttgaagataag
cttattgaaaatccttttatcgagtttgagtatcccattgaacatcgtgtgaatcaagtg
ccggtagatcggcatggacatgaagctgatcctgcgatggatcaacaaagtccttggtta
gcgcaaactttggaaacttttttatatgaacaaacaatgttgcatcggcacacggttatt
cgagatgtcatggttgcattgattgactatattgatgatcaaggctatttaccttatacc
tacgaagaattagccgctaagctgcatcaagatcctattgttgtcttagatgcgattact
cttttgcagcaattagaaccagcaggagtggctgcgtataatgtcaaggaatgtttattg
ttgcagactttacaagataagcaggcaccgacgagagctgcttatctattagagaacttt
tttgataatttaaatcatcaggattatgcagcgattcaggctacaacgggtttgagcgaa
gcggtaattcaggaatgtgtttattattatcattcacttcgtccggtccctgcgtcttta
tttgaatctcgcccagtgacgggatcgattcctgatgtcaaagcgtttattgatcaagat
caagtgaagttggagtttaatcaccagtattatccaaggctaaagtttaatcaaacatat
tatcaagagatgaccgagcaagaagattcagacttgcaagcctacattcaaaagcattat
cagcaatatcaaagcatggaacaagccttaaaattgcgagaacaattagtgcttgctgca
agtcaattgattattgatcatcaaaaagattttttcttaaaagttacgccaactccgaaa
ccttatttaatgaaggatttagccgaacaaatgggcttatcagaagctttggtacgatta
atcgtgatgaataaaaacttgatgtttaatgaagtggtctattctttatcagattttatc
aatgtttctgctaaagtaggtcggtcaggattgtcagccttgaatattcaagccttgata
aaaaatattattcacgagcaggggtcagctattaccgatcaagcagtggttgaattatta
gccaaagatcgcattatgattagtcatcatttagtaaaacgttatcgtgatagcatgaat
aatgatcagccataa
DBGET
integrated database retrieval system
