Facklamia hominis: R0V13_04365
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Entry
R0V13_04365 CDS
T09549
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fhm
Facklamia hominis
Brite
KEGG Orthology (KO) [BR:
fhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fhm03016
]
R0V13_04365 (truB)
Enzymes [BR:
fhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R0V13_04365 (truB)
Transfer RNA biogenesis [BR:
fhm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R0V13_04365 (truB)
Prokaryotic type
R0V13_04365 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Sec3-PIP2_bind
Motif
Other DBs
NCBI-ProteinID:
WPJ91597
LinkDB
All DBs
Position
873962..874885
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AA seq
307 aa
AA seq
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MYNGLIAIWKESGMTSHDVVFQLRKIFAMKKIGHTGTLDPDVEGVLLVCLGQGTKLVDYL
MDGRKLYQGEVTLGIATDTQDASGQVIDQKPIQVAIGDSLIDRVLSGFNGWIDQEAPLYS
AVKVNGKKLYEYARAGIEVDPPIRSVWVDYFKRTGPSIYNPNQRTQCFNFEVSCGKGTYV
RTLAVDAGKKLAYPAHMSKLERLATGGFNKDQSWSLDQLRILKEEGRLDQAVIPLEVAVA
NLPRYDLSSEQAQKVQNGVLLEKDYFDILPDPYLALFEEDCLLAIYQVHPKKTDYLKPYK
MFPKEEG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggattgatcgccatttggaaagaaagcggcatgacctcccatgacgtggtg
tttcaactgaggaagatttttgcgatgaagaaaattggacatacaggtaccctagacccc
gatgtagaaggggtcttgttggtttgcctaggccaagggaccaagctggttgattattta
atggatgggagaaagttgtatcaaggggaagtaacacttggaattgcaactgacacgcaa
gatgcaagtgggcaagtcattgatcaaaaaccgattcaagttgcgattggagattcgctg
attgatcgtgttttatctggatttaatggttggatcgatcaagaagcacccctttattcc
gcggttaaggtcaatggtaaaaaactctatgaatatgctcgagctggaatcgaggtagat
cctccaatacgatcggtttgggtggattattttaaacgaacaggacctagtatttataat
ccaaatcaacgtactcaatgctttaactttgaagtatcctgtggcaaggggacctatgta
cgaaccttagcagttgatgctggtaagaagttagcttatccggctcatatgtctaaactt
gaacgattggcgacaggtggttttaataaggatcaatcatggtccttagaccaattaaga
attttaaaggaagaaggacggttggatcaagctgtcattccattggaagtagcggttgct
aacttgcctcgctatgacttaagctctgaacaagcccaaaaagttcaaaatggtgtccta
ttagagaaggattattttgatattctacctgatccttatttagctttatttgaggaggat
tgcttgctggccatttatcaagttcatcccaaaaaaacagattatttgaaaccttataag
atgtttcctaaggaagaaggttaa
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